DRSC/TRiP Functional Genomics Resources

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Protein Alignment apt and CG3548

DIOPT Version :10

Sequence 1:NP_001261153.1 Gene:apt / 37734 FlyBaseID:FBgn0015903 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_611941.1 Gene:CG3548 / 37932 FlyBaseID:FBgn0035033 Length:453 Species:Drosophila melanogaster


Alignment Length:449 Identity:84/449 - (18%)
Similarity:154/449 - (34%) Gaps:148/449 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 KRERTQNWNHQEKKYLLDLCRKDMRIIENKRLDAGLTAVKNKAWKIIHQKFSNQFGTDRTCNRLK 132
            :::|:.||...|:..||::.:..:..:||:.:||.....|..||..|.::|:......|...:::
  Fly    64 RKKRSLNWEEAERGLLLEVIKSKVAFVENRSVDAKSIKAKRLAWSQITKQFNALNFRHRLLEQIQ 128

  Fly   133 EQWRRMKACTRNEILDYNNRLARFGAEVADRKKPSPFTFEVWDFMQEAKKACKSEALDGIDYSKI 197
            .|||.||...:.|               ..:|.|                  |:|||:|:     
  Fly   129 VQWRSMKNSAKRE---------------HQQKHP------------------KTEALEGM----- 155

  Fly   198 PLALEEGFEYREDYKFNP-----EDHDMDDSRTPPQELCDVDIKEEENNETFNETFNHHHLNQSD 257
                 ...|:.|:.:.:|     :....:.:....:||.|:|  |:|:..               
  Fly   156 -----RMIEFLEEMQKDPVTSRSQTRSANTNGALKKELMDID--EDEDMP--------------- 198

  Fly   258 ILGSGERLSVSPNHSISRNGIHEAESPATISTSNVLDSSGAYMAGGGDMSGFQANFNMNNISATL 322
                   |:..||   |.|.     |..|:.||.:...|......|||....|..   |......
  Fly   199 -------LAALPN---STNA-----SEDTLQTSTIAIPSPPPSTAGGDGDSQQEG---NPAQLPA 245

  Fly   323 EALNALRSGQFPSAAAAAAAAIHQHQAQAQVAMHHQHNNNNNNNNNNEDDEDSMKPQSKRQR--T 385
            :.....::.|.||.|                      ....:.....|:::....|:.:|||  :
  Fly   246 QRRKRTKAKQSPSGA----------------------KTETSGETGEENEKGVGPPRKRRQRNLS 288

  Fly   386 SSGSMLGSEDQAPV-LAPSVP--ASSDSQALERSGSSNGLTMPGTAVSTNANSSSSNNNNFELRM 447
            .:.|:|..|::|.. .|||..  |.::||:|:...::.                           
  Fly   289 QAQSLLSDENEASTNAAPSATPVADTNSQSLDLVAATE--------------------------- 326

  Fly   448 FMEMQSKEHMMRM----KILEVQLQAAKHSRDL------VEINKTLALQKLQLELASKR 496
             :|.:.|:.:.|:    ::.|:.....:|.:.|      .|:......|:..|:|...|
  Fly   327 -IEQKYKQDLFRLLKQARLAEIDYARREHEQKLRFEQMEQEVKMAYYRQEQDLKLRHMR 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aptNP_001261153.1 Myb_DNA-bind_5 71..148 CDD:433544 22/76 (29%)
CG3548NP_611941.1 Myb_DNA-bind_5 70..144 CDD:433544 21/88 (24%)

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