DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pi3K59F and Atr

DIOPT Version :9

Sequence 1:NP_477133.1 Gene:Pi3K59F / 37733 FlyBaseID:FBgn0015277 Length:949 Species:Drosophila melanogaster
Sequence 2:XP_003750609.1 Gene:Atr / 685055 RGDID:1305796 Length:2636 Species:Rattus norvegicus


Alignment Length:489 Identity:97/489 - (19%)
Similarity:182/489 - (37%) Gaps:133/489 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   572 AHDMYAMVL-----KMFLKVLENGNFNLRGI---FYNLRKQR--RFIDELVKLVKLVAKEPGNRN 626
            :||...:||     |:||...:...:.:..:   .|.:|..|  ..:.:.:.:.|.:.|..|:..
  Rat  2147 SHDEVFVVLMEIIAKVFLAYPQQAMWMMTAVSKSSYPMRVNRCKEILTKAIHMKKSLEKFVGDAT 2211

  Fly   627 KKTEKFQKL-----------------------LAEQDMFKVNFTNFEPIPFPLDPEI-------- 660
            :.|:|..:|                       |.|...|.......:.:..|..|.|        
  Rat  2212 RLTDKLLELCNKSVDGSNSTLSMSTHFKMLKKLVEDPTFSEILIPLQSVMIPTLPSILGAHANHD 2276

  Fly   661 -------YIT---KIVPMRTSLFKSALMPAKLTFVTSIAHHEYAAIFKHGDDLRQDQLILQMITL 715
                   |:.   .:|.:.:||.|    |.|::...|.... |..:.|..||||:|..:::..:|
  Rat  2277 PFPGHWAYLAGFDDVVEILSSLQK----PKKISLKGSDGKF-YIMMCKPKDDLRKDCRLMEFNSL 2336

  Fly   716 MDKLLRRE----NLDLKLTPYKVLATSSKHGFLQYVD---------------------------- 748
            ::|.||::    ..:|.:..|.|:..:.:.|.:::|:                            
  Rat  2337 INKSLRKDAESRRRELHIRTYAVIPLNDECGIIEWVNNTAGLRPILTKLYKEKGVYMTGKELRQC 2401

  Fly   749 ----SCTVAE--------VLAREGNI-HNFFRKHHPCDNGPYGISAEVMDTYIKSCAGYCVITYL 800
                |..::|        :|.|...: |.:|.:..|.....|...:    .|.:|.|...::.|:
  Rat  2402 MLPKSAALSEKLKVFQEILLPRHPPVFHEWFLRTFPDPTSWYSSRS----AYCRSTAVMSMVGYI 2462

  Fly   801 LGVGDRHLDNLLLTT-NGKLFHIDFGYILGRDPK---PMPPPMKLSKEMVEAMGGISSEHHHEFR 861
            ||:||||.:|:|..: .|:..|:||..:..:...   |...|.:|:..||..||.:.:|  ..||
  Rat  2463 LGLGDRHGENILFDSFTGECVHVDFNCLFNKGETFEVPEIVPFRLTHNMVNGMGPMGTE--GLFR 2525

  Fly   862 KQCYTAYLHLRRHANVMLNLFSLMVDATVPDIALEPDKAVK---KVEENLQLGLTDEEAVQHLQS 923
            :.|......:|.....::::....:.    |..:|..|.||   |...|....:.:|:|..|   
  Rat  2526 RACEVTLRLMRDQREPLMSVLKTFLH----DPLVEWSKPVKGHSKAPPNETGEVVNEKAKTH--- 2583

  Fly   924 LLDVS------------ITAVMPALVEQIHRFTQ 945
            :||:.            :|.:..::...:|...|
  Rat  2584 VLDIEQRLQGVIKTRNRVTGLPLSIEGHVHYLIQ 2617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pi3K59FNP_477133.1 C2_PI3K_class_III 27..186 CDD:176042
PI3Ka_III 284..561 CDD:238442
PI3Kc_III 601..945 CDD:270628 88/450 (20%)
AtrXP_003750609.1 UME 1120..1226 CDD:214825
FAT 1766..2087 CDD:280429
TEL1 <2118..2636 CDD:227365 97/489 (20%)
PIKKc_ATR 2285..2559 CDD:270625 61/288 (21%)
FATC 2605..2636 CDD:280430 2/13 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5032
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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