DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ItgaPS5 and ITGA8

DIOPT Version :9

Sequence 1:NP_611808.2 Gene:ItgaPS5 / 37732 FlyBaseID:FBgn0034880 Length:1018 Species:Drosophila melanogaster
Sequence 2:NP_003629.2 Gene:ITGA8 / 8516 HGNCID:6144 Length:1063 Species:Homo sapiens


Alignment Length:1085 Identity:281/1085 - (25%)
Similarity:442/1085 - (40%) Gaps:206/1085 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 RSSYFGYSLVI-----RPTSIFVGAPRAQSTLESQGSINETGAVYRCPL-ASGS--CSHYVLNDK 99
            :.|||||::..     |..|:.||||:|.:   ||..|.|.||||.||. |.||  |.....:..
Human    53 KGSYFGYAVDFHIPDARTASVLVGAPKANT---SQPDIVEGGAVYYCPWPAEGSAQCRQIPFDTT 114

  Fly   100 LNKQF--------------QWLGGSMDGGTKDTDKLLVCAPRFF------VPKNKNYGQMRGICY 144
            .|::.              ||.|.::..   ...|::.|||.:.      .|:....    |.||
Human   115 NNRKIRVNGTKEPIEFKSNQWFGATVKA---HKGKVVACAPLYHWRTLKPTPEKDPV----GTCY 172

  Fly   145 WVRDTVADTPPLSDVRTISLIPSQAEEHFMLELGLSAHVTDDNSGFLIGAPGVRSWKGSVLVHRG 209
            ......:.....|..|..:..|   |.....:.|.|.... .|...::|.||...|:|.|:....
Human   173 VAIQNFSAYAEFSPCRNSNADP---EGQGYCQAGFSLDFY-KNGDLIVGGPGSFYWQGQVITASV 233

  Fly   210 EDLAAQGSYAVKML--------------DSWDWVKNHFTYVGYALSSGYFSSNNRTSLLYVTTAP 260
            .|:.|  :|:.|.:              .|:|     .:|:||::::|.|:.:::..|  |...|
Human   234 ADIIA--NYSFKDILRKLAGEKQTEVAPASYD-----DSYLGYSVAAGEFTGDSQQEL--VAGIP 289

  Fly   261 SSVLNTGKAYIFDVVGEIVRKLHVFHGEQLGEYFGYSVVAEDLNGDGLTDVVVSAPL----NALG 321
            ....|.|  |:..:....:..:..|.|||:..||||:||..|:|.|||.||:|.|||    ....
Human   290 RGAQNFG--YVSIINSTDMTFIQNFTGEQMASYFGYTVVVSDVNSDGLDDVLVGAPLFMEREFES 352

  Fly   322 DSYDVGAIYVFINKGLFKFEKKIIRLPLSSGARFGSSLSKVGDINHDGYNDLAVGAPFAG---NG 383
            :..:||.||:::......|....|.....:..||||:::.:||:|.|||||:|:|.||||   .|
Human   353 NPREVGQIYLYLQVSSLLFRDPQILTGTETFGRFGSAMAHLGDLNQDGYNDIAIGVPFAGKDQRG 417

  Fly   384 AVFIFLGSEHGLRDEPSQRLDAPSREPGPYGAHM----FGQGLSRGSDIDGNGFNDLAIGAPGAE 444
            .|.|:.|::.||..:|||.|.      |.:.:|.    ||..|...||||.|.:.||.:||.|..
Human   418 KVLIYNGNKDGLNTKPSQVLQ------GVWASHAVPSGFGFTLRGDSDIDKNDYPDLIVGAFGTG 476

  Fly   445 AVYLYRAYPVVKIHATVRSESRAIRPEQET------ITVTACYRLETTSKA------------RQ 491
            .|.:|||.|||.:.|.:......|..|.:|      :|..||:.|...:..            .:
Human   477 KVAVYRARPVVTVDAQLLLHPMIINLENKTCQVPDSMTSAACFSLRVCASVTGQSIANTIVLMAE 541

  Fly   492 MQQQELTFRMTIDELLQRVSFAPMRTNEVSFQAQAGLSGSCRNFSVGVHYTGGI---FTPIDLEL 553
            :|...|..:..|...|...:....|...:..:.|.  |..|::|.|.:......   .:||::.|
Human   542 VQLDSLKQKGAIKRTLFLDNHQAHRVFPLVIKRQK--SHQCQDFIVYLRDETEFRDKLSPINISL 604

  Fly   554 HYELAKKIPHSHEAFCESCAVVDPLEPKYATGTLS----FMTGCAA-HVCVSDLQLSSKDVNSSF 613
            :|.|      ....|.|... |.|:...|....:|    .:..|.. ::||.||:||::......
Human   605 NYSL------DESTFKEGLE-VKPILNYYRENIVSEQAHILVDCGEDNLCVPDLKLSARPDKHQV 662

  Fly   614 IFGSLEVLSFSYEITNSGEPAYVAQFNVTSSARLPFAKV--------PGNCRVRHE----VMLCD 666
            |.|....|.......|.||.||.|:..|.......:..:        |.:|..:.|    :::||
Human   663 IIGDENHLMLIINARNEGEGAYEAELFVMIPEEADYVGIERNNKGFRPLSCEYKMENVTRMVVCD 727

  Fly   667 LNGGRALARGDSESLTIIFDVTQL--SGQSLTIEAAVSSAGMDQNPKDNTMSTTISLREYAEIDA 729
            |  |..:..|.:.||.:.|.|.:|  :..|:..:..:.|:..| ||..|.:|..|::...|:::.
Human   728 L--GNPMVSGTNYSLGLRFAVPRLEKTNMSINFDLQIRSSNKD-NPDSNFVSLQINITAVAQVEI 789

  Fly   730 SGGPIDGHIAL-------KEYPYSAE-----VNNSYEFKSHGPSIIDELTVYVDVPIAYTVTGSA 782
            .|......|.|       :|.|:..|     |.:.||..:.|||.|.:..:.|..|.:.......
Human   790 RGVSHPPQIVLPIHNWEPEEEPHKEEEVGPLVEHIYELHNIGPSTISDTILEVGWPFSARDEFLL 854

  Fly   783 GIKSIFNISSLQMQAT---HGSELVPIKLYDQTNTLAKEYPLEDSSRRANRKRRELQQDQYAIMP 844
            .|..|..:..||.|..   :..::.|....:.|..|: .:....:.....|||            
Human   855 YIFHIQTLGPLQCQPNPNINPQDIKPAASPEDTPELS-AFLRNSTIPHLVRKR------------ 906

  Fly   845 DVNI--------SDILTKENLPANRTLVLDCLRG------NWTICVRSQMRVQL---KPEQPIDL 892
            ||::        :.||...|:   ..|.:.|..|      :..:.|||::....   :...|..|
Human   907 DVHVVEFHRQSPAKILNCTNI---ECLQISCAVGRLEGGESAVLKVRSRLWAHTFLQRKNDPYAL 968

  Fly   893 R--ISFKVDLNDFVNTFDYLVIFTNVEMFKEGDSTSIALKRNL---KPNVIFNYSETPLPIWYII 952
            .  :||:|....:.:         ......||   ||.:|.::   .|||.|:     :|:|.||
Human   969 ASLVSFEVKKMPYTD---------QPAKLPEG---SIVIKTSVIWATPNVSFS-----IPLWVII 1016

  Fly   953 LSLIAGHLLLGAMTYILYKLRFFKRGKKEELKRLLEEHRSETKEP 997
            |:::.|.|:|..:|..|:|..||.|.:..:......|..:..|.|
Human  1017 LAILLGLLVLAILTLALWKCGFFDRARPPQEDMTDREQLTNDKTP 1061

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItgaPS5NP_611808.2 VCBS 302..375 CDD:338792 29/76 (38%)
Int_alpha 351..403 CDD:214549 27/54 (50%)
Int_alpha 417..463 CDD:214549 21/49 (43%)
Integrin_alpha2 451..836 CDD:337057 98/439 (22%)
ITGA8NP_003629.2 Int_alpha 54..112 CDD:214549 26/60 (43%)
Int_alpha 263..311 CDD:214549 12/56 (21%)
Int_alpha 317..>365 CDD:214549 21/47 (45%)
Int_alpha 383..437 CDD:214549 27/53 (51%)
Int_alpha 448..492 CDD:214549 20/43 (47%)
Integrin_alpha2 483..934 CDD:285619 104/478 (22%)
Integrin_alpha 1035..1049 CDD:278771 4/13 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165142007
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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