DRSC/TRiP Functional Genomics Resources

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Protein Alignment ItgaPS5 and Itga7

DIOPT Version :9

Sequence 1:NP_611808.2 Gene:ItgaPS5 / 37732 FlyBaseID:FBgn0034880 Length:1018 Species:Drosophila melanogaster
Sequence 2:NP_110469.1 Gene:Itga7 / 81008 RGDID:71022 Length:1135 Species:Rattus norvegicus


Alignment Length:1126 Identity:282/1126 - (25%)
Similarity:459/1126 - (40%) Gaps:252/1126 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 SYFGYSLVI------RPTS-IFVGAPRAQSTLESQGSINETGAVYRCPLASGSCSHYVLN----- 97
            |.||:|:.:      ||.| :.||||:|.:....|.  |.||.::.|||:......|.::     
  Rat    50 SLFGFSVALHRQLQPRPQSWLLVGAPQALALPGQQA--NRTGGLFACPLSLEETDCYRVDIDRGA 112

  Fly    98 --DKLNKQFQWLGGSM----DGGTKDTDKLLVCAPRFFVPKNKNYGQMR------GICYWVRDTV 150
              .|.:|:.||||.|:    .||     |::.||.|:  ...:...|:.      |.|:.:...:
  Rat   113 NVQKESKENQWLGVSVRSQGAGG-----KVVTCAHRY--ESRQRVDQVLETRDVIGRCFVLSQDL 170

  Fly   151 ADTPPL--SDVRTISLIPSQAEEHFMLELGLSAHVTDDNSGFLIGAPGVRSWKGSVLVHRGEDLA 213
            |....|  .:.:.....|...|:....:.|.:|..:.|:...:.||||..:|||.:.| ...|.:
  Rat   171 AIRDELDGGEWKFCEGRPQGHEQFGFCQQGTAATFSPDSHYLIFGAPGTYNWKGLLFV-TNIDSS 234

  Fly   214 AQGSYAVKMLD--------SWDWVKNHFTYVGYALSSGYFSSNNRTSLLYVTTAPSSVLNTGKAY 270
            .......|.||        :.|...|  :|:|:::.||.....:. .|.:|..||.: .:.|...
  Rat   235 DPDQLVYKTLDPADRLTGPAGDLTLN--SYLGFSIDSGKGLMRSE-ELSFVAGAPRA-NHKGAVV 295

  Fly   271 IF--DVVGEIVRKLHVFHGEQLGEYFGYSVVAEDLNGDGLTDVVVSAPL-----NALGDSYDVGA 328
            |.  |....::.:: |..||:|...||||:...|||.||..|::|.||.     ..||     ||
  Rat   296 ILRKDSASRLIPEV-VLSGERLTSGFGYSLAVTDLNSDGWADLIVGAPYFFERQEELG-----GA 354

  Fly   329 IYVFINKGLFKFEKKIIRLPLSSGARFGSSLSKVGDINHDGYNDLAVGAPFAGNGAVFIFLGSEH 393
            :||::|:|....:...:||..|..:.||.||:.:||:|.||:.|:||||||.|:|.|||:.||..
  Rat   355 VYVYMNQGGHWADISPLRLCGSPDSMFGISLAVLGDLNQDGFPDIAVGAPFDGDGKVFIYHGSSL 419

  Fly   394 GLRDEPSQRLDAPSREPGPYGAHMFGQGLSRGSDIDGNGFNDLAIGAPGAEAVYLYRAYPVVKIH 458
            |:..:|||.|:..:     .|...||..||.|.|:|||.:.||.:|:. |:...|:||.||:.:.
  Rat   420 GVVTKPSQVLEGEA-----VGIKSFGYSLSGGLDVDGNHYPDLLVGSL-ADTAALFRARPVLHVS 478

  Fly   459 ATVRSESRAIRPEQET--------ITVTAC-----------------YRLE-TTSKARQMQQQEL 497
            ..:..:.|||..||..        :.|..|                 |.|: .|.:..:.|...:
  Rat   479 QEIFIDPRAIDLEQPNCADGRLVCVHVKVCFSYVAVPSSYSPIVVLDYVLDGDTDRRLRGQAPRV 543

  Fly   498 TFRMTIDELLQRVSFAPMR--------TNEVSFQAQAGLSGSCRNFSVGVHYTGGIFTPIDLELH 554
            ||.....:.|:..|...:.        ..:..||.|..:....|...|.:.|  |:.||      
  Rat   544 TFPGRGPDDLKHQSSGTVSLKHQHDRVCGDTVFQLQENVKDKLRAIVVTLSY--GLQTP------ 600

  Fly   555 YELAKKIPHSHEAFCESCAVVDPL----EPKYATGTLSFM-TGCA-AHVCVSDLQLSSK------ 607
             .|.::.|.      :...:|.|:    :|......:.|: .||. ..:|.|:|||:..      
  Rat   601 -RLRRQAPD------QGLPLVAPILNAHQPSTQRTEIHFLKQGCGDDKICQSNLQLAQAQFCSRI 658

  Fly   608 ------------DVNSSFIFGSLEVLSFSYEITN----------SGEPAYVAQFNVTSSARLPFA 650
                        |..:.|.......:.....:||          .|:.|:.||...|..|.|.::
  Rat   659 SDTEFQALPMDLDGTALFALSGQPFIGLELTVTNLPSDPARPQADGDDAHEAQLLATLPASLRYS 723

  Fly   651 KVPGNCRVRHEVML---------CDLNGGRALARGDSESLTIIFDVTQLSGQSLTIE-------- 698
            .|.....|...:.|         |:|  |..:.||...:..:|     ||...:|||        
  Rat   724 GVRTLDSVEKPLCLSNENASHVECEL--GNPMKRGTQVTFYLI-----LSTSGITIETTELKVEL 781

  Fly   699 --AAVSSAGMDQNPKDNTMSTTISLREYAEID----ASG----------GPIDGHIALK-EYPYS 746
              |.:|.  .|.:|        :|:|.:..|:    .||          |.:.|..|:: |....
  Rat   782 LLATISE--QDLHP--------VSVRAHVFIELPLSISGVATPQQLFFSGKVKGESAMRSERDVG 836

  Fly   747 AEVNNSYEFKSHGPSIIDELTVYVDVPIAYTVTGSAGIKSIFNISSLQMQATHGSELVPIKLYDQ 811
            ::|.......:.|.|:....:.::::...:.:   |..|.:.....::::...|.|...| ...:
  Rat   837 SKVKYEVTVSNQGQSLNTLGSAFLNIMWPHEI---ANGKWLLYPMRVELEGGQGPEKKGI-CSPR 897

  Fly   812 TNTLAKEYPLEDSSRRANRKRREL-----QQDQYAIMPDVNISDILTKENLPANRTLVLDCLRGN 871
            .|.|    .|:..||  :|:||||     |:....:.|..:...:.:.|    .|.:.|||.:|.
  Rat   898 PNIL----HLDVDSR--DRRRRELGQPEPQEPPEKVEPSTSWWPVSSAE----KRNVTLDCAQGT 952

  Fly   872 WTICVRSQMRVQLKPEQPIDLRISFKVDLNDFVNTFDYLVIFTNVEMFKEGDSTSIALKRNLKPN 936
             ..||     |...|....|......|....:.:||  |..:.:|:..:.....:|.:|.::| |
  Rat   953 -AKCV-----VFSCPLYSFDRAAVLHVWGRLWNSTF--LEEYMSVKSLEVIVRANITVKSSIK-N 1008

  Fly   937 VIFNYSETPLPI----------------WYIILSLIAGHLLLGAMTYILYKLRFFKRGKKEELK- 984
            ::...:.|.:|:                |.|:|:::||.|:|..:..:|:||.||||.|..|.. 
  Rat  1009 LLLRDASTVIPVMVYLDPVAVVAEGVPWWVILLAVLAGLLVLALLVLLLWKLGFFKRAKHPEATV 1073

  Fly   985 ------RLLEEHRSETKEPAT 999
                  ::|.|.|.:.||..|
  Rat  1074 PQYHAVKILREDRQQFKEEKT 1094

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItgaPS5NP_611808.2 VCBS 302..375 CDD:338792 30/77 (39%)
Int_alpha 351..403 CDD:214549 27/51 (53%)
Int_alpha 417..463 CDD:214549 18/45 (40%)
Integrin_alpha2 451..836 CDD:337057 96/491 (20%)
Itga7NP_110469.1 FG-GAP 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 38..103 19/54 (35%)
Int_alpha 48..109 CDD:214549 20/60 (33%)
FG-GAP 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 110..165 16/61 (26%)
FG-GAP 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 185..238 14/53 (26%)
FG-GAP 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 248..305 13/60 (22%)
Int_alpha 260..311 CDD:214549 12/55 (22%)
FG-GAP 5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 306..367 25/66 (38%)
Int_alpha 318..371 CDD:214549 21/57 (37%)
FG-GAP 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 368..423 27/54 (50%)
Int_alpha 377..429 CDD:214549 27/51 (53%)
FG-GAP 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 427..486 21/64 (33%)
Int_alpha 439..>479 CDD:214549 18/40 (45%)
Integrin_alpha2 471..960 CDD:285619 107/540 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 905..933 9/29 (31%)
GFFKR motif 1061..1065 2/3 (67%)
3 X 4 AA repeats of D-X-H-P 1111..1130
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335713
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

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