Sequence 1: | NP_611808.2 | Gene: | ItgaPS5 / 37732 | FlyBaseID: | FBgn0034880 | Length: | 1018 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_113879.2 | Gene: | Itgad / 64350 | RGDID: | 71075 | Length: | 1161 | Species: | Rattus norvegicus |
Alignment Length: | 1314 | Identity: | 264/1314 - (20%) |
---|---|---|---|
Similarity: | 409/1314 - (31%) | Gaps: | 554/1314 - (42%) |
- Green bases have known domain annotations that are detailed below.
Fly 47 FGYSLV-IRPTSIFVGAPRAQSTLESQGSINETGAVYRCPLASGSCSHYVLNDKLNKQFQWLGGS 110
Fly 111 MDGGTKDTDKLLVCAP-----------------------RFF--VP------------------- 131
Fly 132 ----KNKNYGQMR---------------------------------------------------- 140
Fly 141 GICY-----------------------------------------------------------WV 146
Fly 147 RDTVADTPPLSDVRTISLIP-----------------------------------SQAEEHFMLE 176
Fly 177 LGLSAHVTDDNSGFLIGAPGVRSWKGSVLVHRGEDLAAQGSYAVKMLDSWDWVKNHFTYVGYALS 241
Fly 242 SGYFSSNNRTSLLYVTTAPSSVLNTGKAYIFDVVGEIVRKLHVFHGEQLGEYFGYSVVAEDLNGD 306
Fly 307 GLTDVVVSAPLNALGDSYDVGAIYVFIN--------------KGLFKFEKKIIRLPLSSGARFGS 357
Fly 358 SLSKVGDINHDGYNDLAVGAP--FAGNGAVFIFLG-SEHGLRDEPSQRLDAPSREPGPYGAHM-- 417
Fly 418 ----FGQGLSRGSDIDGNGFNDLAIGAPGAEAVYLYRAYPVVKIHATVRSESRAIRPEQETITVT 478
Fly 479 ACY-RLETTSKARQMQ----------------QQELTFRMTID--ELLQRVSFAPMRTNEVSFQA 524
Fly 525 QAGLSGSCRNFSVGV-HYTGGIFTPIDLELHYELAKKIPHSHEAFCESCAVVDPLEPK------- 581
Fly 582 -----YATGTLSFMTGCAAH-VCVSDLQLSSKDVNSSFIFGSLEVL--SFSYEIT------NSGE 632
Fly 633 PAYVAQFNVTSSARLPFAKVPG--------------------------NCRVRHEVMLCDLNGGR 671
Fly 672 ALARGDSESLTIIFDVTQLS--GQSLTIEAAVSSAGMDQNPKDNTMSTTISLREYAEIDASGGPI 734
Fly 735 DGHIALKEYPYSAEVNNSYEFKSHGPSIIDELTVYVDVPIAYTVTGSAGIKSIFNISSLQMQAT- 798
Fly 799 -------HG------------SELVPIKLYDQTN---------------TLAKEYPLEDSSRRAN 829
Fly 830 RKRRELQQDQYAIMPDVNISDILTKENLPANRTLVLDC------------------------LRG 870
Fly 871 N----WTICVRSQMRVQLKPEQPIDLRISFKVDLNDFVNTFDYLVIFTNVEMFKEGDSTSI--AL 929
Fly 930 KRNLKPNVIFNYSETPLPIWYIILSLIAGHLLLGAMTYILYKLRFFKRGKKEELKRLLEEHRSET 994
Fly 995 KEPAT------DCE 1002 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ItgaPS5 | NP_611808.2 | VCBS | 302..375 | CDD:338792 | 19/86 (22%) |
Int_alpha | 351..403 | CDD:214549 | 23/54 (43%) | ||
Int_alpha | 417..463 | CDD:214549 | 19/51 (37%) | ||
Integrin_alpha2 | 451..836 | CDD:337057 | 84/488 (17%) | ||
Itgad | NP_113879.2 | FG-GAP 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 | 21..78 | 17/46 (37%) | |
FG-GAP 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 | 79..138 | 12/59 (20%) | |||
FG-GAP 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 | 341..392 | 14/52 (27%) | |||
FG-GAP 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 | 393..444 | 14/61 (23%) | |||
FG-GAP 5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 | 445..505 | 17/71 (24%) | |||
FG-GAP 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 | 508..566 | 21/57 (37%) | |||
FG-GAP 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 | 571..631 | 23/75 (31%) | |||
GFFKR motif | 1126..1130 | 2/3 (67%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166335738 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR23220 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.940 |