DRSC/TRiP Functional Genomics Resources

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Protein Alignment ItgaPS5 and Itgad

DIOPT Version :9

Sequence 1:NP_611808.2 Gene:ItgaPS5 / 37732 FlyBaseID:FBgn0034880 Length:1018 Species:Drosophila melanogaster
Sequence 2:NP_113879.2 Gene:Itgad / 64350 RGDID:71075 Length:1161 Species:Rattus norvegicus


Alignment Length:1314 Identity:264/1314 - (20%)
Similarity:409/1314 - (31%) Gaps:554/1314 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 FGYSLV-IRPTSIFVGAPRAQSTLESQGSINETGAVYRCPLASGSCSHYVLNDKLNKQFQWLGGS 110
            ||.::| ...:.:.||||     ||:. ::|:||.:|.|..|:|.|...||...|......||.|
  Rat    37 FGQTVVQFGGSRLVVGAP-----LEAV-AVNQTGRLYDCAPATGMCQPIVLRSPLEAVNMSLGLS 95

  Fly   111 MDGGTKDTDKLLVCAP-----------------------RFF--VP------------------- 131
            :...|.:. :||.|.|                       :|.  ||                   
  Rat    96 LVTATNNA-QLLACGPTAQRACVKNMYAKGSCLLLGSSLQFIQAVPASMPECPRQEMDIAFLIDG 159

  Fly   132 ----KNKNYGQMR---------------------------------------------------- 140
                ..:::.||:                                                    
  Rat   160 SGSINQRDFAQMKDFVKALMGEFASTSTLFSLMQYSNILKTHFTFTEFKNILDPQSLVDPIVQLQ 224

  Fly   141 GICY-----------------------------------------------------------WV 146
            |:.|                                                           .|
  Rat   225 GLTYTATGIRTVVEELFHSKNGSRKSAKKILLVITDGQKYRDPLEYSDVIPAADKAGIIRYAIGV 289

  Fly   147 RDTVADTPPLSDVRTISLIP-----------------------------------SQAEEHFMLE 176
            .|...:...|.::.||...|                                   |.:.:|.|.:
  Rat   290 GDAFQEPTALKELNTIGSAPPQDHVFKVGNFAALRSIQRQLQEKIFAIEGTQSRSSSSFQHEMSQ 354

  Fly   177 LGLSAHVTDDNSGFLIGAPGVRSWKGSVLVHRGEDLAAQGSYAVKMLDSWDWVKNHFTYVGYALS 241
            .|.|:.:|.|  |.::||.|..||.|...::.........:.:.:.:|..|      :|:||:.:
  Rat   355 EGFSSALTSD--GPVLGAVGSFSWSGGAFLYPPNTRPTFINMSQENVDMRD------SYLGYSTA 411

  Fly   242 SGYFSSNNRTSLLYVTTAPSSVLNTGKAYIFDVVGEIVRKLHVFHGEQLGEYFGYSVVAEDLNGD 306
            ..::...:  ||  :..||.. .:|||..||.......|......|.|:|.|||.|:.:.|::.|
  Rat   412 VAFWKGVH--SL--ILGAPRH-QHTGKVVIFTQEARHWRPKSEVRGTQIGSYFGASLCSVDVDRD 471

  Fly   307 GLTDVVVSAPLNALGDSYDVGAIYVFIN--------------KGLFKFEKKIIRLPLSSGARFGS 357
            |.||:|:            :||.:.:..              :|.::.|..:.........|||.
  Rat   472 GSTDLVL------------IGAPHYYEQTRGGQVSVCPVPGVRGRWQCEATLHGEQGHPWGRFGV 524

  Fly   358 SLSKVGDINHDGYNDLAVGAP--FAGNGAVFIFLG-SEHGLRDEPSQRLDAPSREPGPYGAHM-- 417
            :|:.:||:|.|...|:|:|||  ....|||:||.| |...:...||||:.         |:.:  
  Rat   525 ALTVLGDVNGDNLADVAIGAPGEEESRGAVYIFHGASRLEIMPSPSQRVT---------GSQLSL 580

  Fly   418 ----FGQGLSRGSDIDGNGFNDLAIGAPGAEAVYLYRAYPVVKIHATVRSESRAIRPEQETITVT 478
                |||.||.|.|:..:|..|||:||.|  .|.|.|:.|::|:..::|     ..|.:....|.
  Rat   581 RLQYFGQSLSGGQDLTQDGLVDLAVGAQG--HVLLLRSLPLLKVELSIR-----FAPMEVAKAVY 638

  Fly   479 ACY-RLETTSKARQMQ----------------QQELTFRMTID--ELLQRVSFAPMRTNEVSFQA 524
            .|: |..|..:|.:..                |..:.:.:.:|  .|:.|..|...:...::.:.
  Rat   639 QCWERTPTVLEAGEATVCLTVHKGSPDLLGNVQGSVRYDLALDPGRLISRAIFDETKNCTLTGRK 703

  Fly   525 QAGLSGSCRNFSVGV-HYTGGIFTPIDLELHYELAKKIPHSHEAFCESCAVVDPLEPK------- 581
            ..||...|....:.: .......:||.|.|::.|.:                |...|:       
  Rat   704 TLGLGDHCETVKLLLPDCVEDAVSPIILRLNFSLVR----------------DSASPRNLHPVLA 752

  Fly   582 -----YATGTLSFMTGCAAH-VCVSDLQLSSKDVNSSFIFGSLEVL--SFSYEIT------NSGE 632
                 :.|.:|.|...|... :|..||.:       ||.|..|:||  ..|.|:|      |.||
  Rat   753 VGSQDHITASLPFEKNCKQELLCEGDLGI-------SFNFSGLQVLVVGGSPELTVTVTVWNEGE 810

  Fly   633 PAYVAQFNVTSSARLPFAKVPG--------------------------NCRVRHEVMLCDLNGGR 671
            .:|.........|.|.:.:|.|                          :|.:.|.:         
  Rat   811 DSYGTLVKFYYPAGLSYRRVTGTQQPHQYPLRLACEAEPAAQEDLRSSSCSINHPI--------- 866

  Fly   672 ALARGDSESLTIIFDVTQLS--GQSLTIEAAVSSAGMDQNPKDNTMSTTISLREYAEIDASGGPI 734
             ...|...:..|.|||:..:  |..|.:.|..||    :|.|.:|..|...|             
  Rat   867 -FREGAKTTFMITFDVSYKAFLGDRLLLRAKASS----ENNKPDTNKTAFQL------------- 913

  Fly   735 DGHIALKEYPYSAEVNNSYEFKSHGPSIIDELTVYVDVPIAYTVTGSAGIKSIFNISSLQMQAT- 798
                                                ::|:.|||         :.:.|.|..:| 
  Rat   914 ------------------------------------ELPVKYTV---------YTLISRQEDSTN 933

  Fly   799 -------HG------------SELVPIKLYDQTN---------------TLAKEYPLEDSSRRAN 829
                   ||            :.|.|:||..:.|               ||:.  |.:..|..:.
  Rat   934 HVNFSSSHGGRRQEAAHRYRVNNLSPLKLAVRVNFWVPVLLNGVAVWDVTLSS--PAQGVSCVSQ 996

  Fly   830 RKRRELQQDQYAIMPDVNISDILTKENLPANRTLVLDC------------------------LRG 870
            .|            |..| .|.||:    ..|..||||                        |||
  Rat   997 MK------------PPQN-PDFLTQ----IQRRSVLDCSIADCLHFRCDIPSLGIQDELDFILRG 1044

  Fly   871 N----WTICVRSQMRVQLKPEQPIDLRISFKVDLNDFVNTFDYLVIFTNVEMFKEGDSTSI--AL 929
            |    | :....|.:|.|..|..|               |||     |:|.....|....:  .:
  Rat  1045 NLSFGW-VSQTLQEKVLLVSEAEI---------------TFD-----TSVYSQLPGQEAFLRAQV 1088

  Fly   930 KRNLKPNVIFNYSETPLPIWYIILSLIAGHLLLGAMTYILYKLRFFKRGKKEELKRLLEEHRSET 994
            :..|:..|::.      ||:.:..|.:.|.|||..:|.:||||.||||..||.|.       .:.
  Rat  1089 ETTLEEYVVYE------PIFLVAGSSVGGLLLLALITVVLYKLGFFKRQYKEMLD-------GKA 1140

  Fly   995 KEPAT------DCE 1002
            .:|.|      .||
  Rat  1141 ADPVTAGQADFGCE 1154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItgaPS5NP_611808.2 VCBS 302..375 CDD:338792 19/86 (22%)
Int_alpha 351..403 CDD:214549 23/54 (43%)
Int_alpha 417..463 CDD:214549 19/51 (37%)
Integrin_alpha2 451..836 CDD:337057 84/488 (17%)
ItgadNP_113879.2 FG-GAP 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 21..78 17/46 (37%)
FG-GAP 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 79..138 12/59 (20%)
FG-GAP 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 341..392 14/52 (27%)
FG-GAP 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 393..444 14/61 (23%)
FG-GAP 5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 445..505 17/71 (24%)
FG-GAP 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 508..566 21/57 (37%)
FG-GAP 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 571..631 23/75 (31%)
GFFKR motif 1126..1130 2/3 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335738
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23220
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.940

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