DRSC/TRiP Functional Genomics Resources

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Protein Alignment ItgaPS5 and itga1

DIOPT Version :9

Sequence 1:NP_611808.2 Gene:ItgaPS5 / 37732 FlyBaseID:FBgn0034880 Length:1018 Species:Drosophila melanogaster
Sequence 2:XP_021334930.1 Gene:itga1 / 570868 ZFINID:ZDB-GENE-091118-115 Length:1183 Species:Danio rerio


Alignment Length:989 Identity:234/989 - (23%)
Similarity:388/989 - (39%) Gaps:242/989 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 KNKNYGQMRGICYWVRDTVADTPP-----LSDVRT-ISLIPSQAEEHFMLE-------------- 176
            :||:..:::.....:....::|..     :||.|. ::::.:...:.|.||              
Zfish   310 QNKSIDEIKKFIEEIEYIASETKSDHFFNVSDERALVTIVDTLGSKIFALEATSGKHTSSFEMEM 374

  Fly   177 --LGLSAHVTDDNSGFLIGAPGVRSWKGSVLVHRGEDLAAQGSYAVKMLDSWDWVKNHF------ 233
              .|.|||.:  .:|.::||.|...|.|:|::..|.:....             .||.|      
Zfish   375 SQAGFSAHTS--KAGVMLGAVGAFDWNGTVVMQAGNEFVVP-------------KKNTFHNPSVQ 424

  Fly   234 ------TYVGYALSSGYFSSNNRTSLLYVTTAPSSVLNTGKAYIFDVVGEIVRKLHVFHGEQLGE 292
                  .||||.:.|.|    ....:||:|.|| ...::|:..::...||.|..:....|||:|.
Zfish   425 RYEGMAGYVGYDVQSAY----TPNGVLYITGAP-RFNHSGRVTVYRFDGENVTIVQTLKGEQIGS 484

  Fly   293 YFGYSVVAEDLNGDGLTDV-VVSAPLNALGDSYDVGAIYVF-INK-GLFKFEK------------ 342
            |||..:...|::||..||: :|:||:....:..:.|.:||: :|: |||:.|.            
Zfish   485 YFGSVLQTHDIDGDNYTDILLVAAPMFMGPERDEQGQVYVYKLNESGLFEHEMTLKPVNQTCCSG 549

  Fly   343 ------KIIRLPLSSGARFGSSLSKVGDINHDGYNDLAVGAPFAGN--GAVFIFLGSEHGLRDEP 399
                  ||:......|||||::::.|.|:|.|.::|:.:|:|...:  |||:|:.||:..::::.
Zfish   550 HSHNNCKIVSKNEPCGARFGTAIAAVPDLNLDKFSDIVIGSPLENDHRGAVYIYHGSQKSIKEKY 614

  Fly   400 SQRLDAPSREPGPYGAHM--FGQGLSRGSDIDGNGFNDLAIGAPGAEAVYLYR---------AYP 453
            .||:.|     |..|..|  |||.:....|::.:|..|:.||..|..|:|..|         .:.
Zfish   615 VQRIAA-----GGDGESMKFFGQSIHGIMDLNDDGIIDVTIGGIGGAALYWSRDVAELLAEMTFD 674

  Fly   454 VVKIHATVRSESRAIRPEQETITV----TACYRLETTSKARQMQQQELT------FRMTIDELLQ 508
            .:||:.            |.|..|    |.|.:.....|.|....:|:.      :.:|:|.|. 
Zfish   675 PIKINL------------QHTCQVHGKTTVCVKTRVCFKYRIKSVKEMNTGTVIRYSLTLDSLR- 726

  Fly   509 RVSFAPMRTNEVSFQAQAGLSGSCRNFSVGVH--YTG---GIFTPIDLELHYELAKKIPHSHEAF 568
              :.|..|.||.. ..:...:.|.||.....|  ||.   ....||.:.|.:.||.:        
Zfish   727 --AVARGRFNETE-DRRLQKNESIRNKFCREHTFYTSDKLDFRDPIMVTLEFGLADE-------- 780

  Fly   569 CESCAVVDPLEPKYATGTLSFMTGCAAHVCVSDLQL-SSKDVNSSFIFGSLEVLSFSYEITNSGE 632
             :...|:|...|.....|::.:...:...||::|.| :|.:::|..|..:.|....:.:|.|:|:
Zfish   781 -DKGPVLDGELPTSLNKTIALVDCGSNEKCVANLHLQASANISSLLIKSNQEKFYVNIDIKNTGD 844

  Fly   633 PAYVAQFNVTSSARLPFAKV---PGNCRVRHEVMLCDLNGGRALARGDSESLTIIF--------- 685
            .||..:..::.:..:.:.||   ..:|...|..::|.: |...|...|.|:..|.|         
Zfish   845 NAYNTKVTLSHTENINYVKVEPKDKDCETNHTRIVCAV-GYPFLKTKDRETFKIQFEPNPSLIRK 908

  Fly   686 DVTQLSGQSLTIEAAVSSAGMDQNPKDNTMSTTISLREYAEIDASGGPI--DGHIALKEYPYSAE 748
            |:.      :.:.|...|...|...|.|..:..|.:|..|.:..:....  :.||.|||      
Zfish   909 DIV------INVTATTDSEQSDSALKRNFETIIIPVRHEASMRFTANKYMKEDHIILKE------ 961

  Fly   749 VNNSYEFKSHGPSIIDELTVYVD-VPIAYTVTGSAGIKSIFNISSLQMQATHGSELVPIKL---- 808
                   |...||:.:..:|..| |.|:||:.....:.|                 .|:||    
Zfish   962 -------KETIPSVFNHTSVIGDEVKISYTIEKDPDMPS-----------------PPVKLTIMF 1002

  Fly   809 -YDQTNTLAKEY--PLEDSSRRANRKRRELQQDQYAIMPDVNISDILTKENLPANRTLVLDCLRG 870
             |   .|.||.:  .|.|.|..|..:......:...|.|....|....||.|   ...:|.|   
Zfish  1003 PY---QTSAKNFLLYLTDLSYTAGIRCSADWINPLKIQPSKPHSLNTKKETL---SIYLLSC--- 1058

  Fly   871 NWTICVRSQMRVQLKPEQPIDLRISFKV-----DLNDFVNTF----------DYLVIFTNVEMFK 920
                         .:.|.|..   ||..     |.|....||          ::..|...|:...
Zfish  1059 -------------KEKENPCQ---SFSCFIPSGDFNQINTTFRLWRPTFIKGEFSTIHMAVDAKL 1107

  Fly   921 EGDSTSI-ALKRNLKPN----VIFNYSETPLPIWYIILSLIAGHLLLGAMTYILYKLRFFKRGKK 980
            |..:|.: .|..|:|..    .:.....|.:|:|.||||::.|.|:|..:.:.|:|..||||...
Zfish  1108 ETQNTDLFVLNENIKTREVRIQVTKDIRTGIPLWIIILSILIGLLILALVIFALWKAGFFKRKSV 1172

  Fly   981 EELKRLLEEHRSET 994
            ||    :.|.:.:|
Zfish  1173 EE----MNEDKKDT 1182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItgaPS5NP_611808.2 VCBS 302..375 CDD:338792 28/93 (30%)
Int_alpha 351..403 CDD:214549 19/53 (36%)
Int_alpha 417..463 CDD:214549 15/56 (27%)
Integrin_alpha2 451..836 CDD:337057 91/422 (22%)
itga1XP_021334930.1 vWFA 167..348 CDD:320736 6/37 (16%)
Int_alpha 482..532 CDD:214549 16/49 (33%)
Int_alpha 565..618 CDD:214549 19/52 (37%)
Integrin_alpha2 661..1070 CDD:312071 104/495 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574930
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23220
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.940

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