DRSC/TRiP Functional Genomics Resources

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Protein Alignment ItgaPS5 and itga11b

DIOPT Version :9

Sequence 1:NP_611808.2 Gene:ItgaPS5 / 37732 FlyBaseID:FBgn0034880 Length:1018 Species:Drosophila melanogaster
Sequence 2:XP_695559.7 Gene:itga11b / 567175 ZFINID:ZDB-GENE-071009-4 Length:1219 Species:Danio rerio


Alignment Length:1305 Identity:275/1305 - (21%)
Similarity:455/1305 - (34%) Gaps:430/1305 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 HRLLFLIFLALKYQSNAMNFSPLPNRVIDAPKHLKTRMIQV----RSSYFGYSLVIRPTS----I 58
            |.|:...:|.|.:.|..|   |.|....    ::.||..:|    |.:.|||::......    :
Zfish    33 HMLMEYTYLLLLWVSALM---PGPRTCF----NIDTRRAKVIKGSREAQFGYTVQQHEADGQKWL 90

  Fly    59 FVGAPRAQSTLESQGSINETGAVYRCPLAS--GSCSHYVL-----------NDKLNKQFQWLGGS 110
            .||||     .|:.|. ::||.||||||.|  .:|:...|           .||:.     ||.:
Zfish    91 LVGAP-----FETSGE-HQTGDVYRCPLESKRTNCTRLHLGKISLNNVSERRDKMR-----LGMT 144

  Fly   111 MDGGTKDTDKLLVCAPRFFVPKNKNYGQMRGIC-------------------------------- 143
            :....|| :..:.|.|.:......:| ...|||                                
Zfish   145 LATNPKD-NSFVACGPLWSYECGSSY-YSTGICSRVDSNFNFTHSIAPAYQRCETYMDIVIVLDG 207

  Fly   144 -------YWVRD----------------------------------------------------- 148
                   |.|:|                                                     
Zfish   208 SNSIYPWYEVQDFLINVLQKFYIGPGQIQVGVVQYGERVVNEFRLDDFRTVDEVVAAAKNIDQRG 272

  Fly   149 ----------TVA--------------------------DTP----------------------- 154
                      .||                          |:|                       
Zfish   273 GEETRTALGINVARTQAFKHGGRPDAKKVMIVITDGESHDSPDLKAAVEESEKDNITLYGIAVLG 337

  Fly   155 --------PLSDVRTISLIPSQAEEHF------------------------------------ML 175
                    |.:.:|.|..|.:..:|||                                    |.
Zfish   338 YYNRRGINPEAFLREIKFIATDPDEHFFSVTDESALKDIVDALGEKIFSLEGTNQNGTAFGLQMS 402

  Fly   176 ELGLSAHVTDDNSGFLIGAPGVRSWKGSVL--VHRGEDLAAQGSYAVKMLDSWDWVKNHFTYVGY 238
            :.|.|:|:.:|  |.|:||.|...|.|:||  ...|:.:..:.||   |.:..:.:|||..|:||
Zfish   403 QAGFSSHIVED--GILVGAVGAYDWNGAVLKETRHGKVIPPKSSY---MKEFPEELKNHGAYLGY 462

  Fly   239 ALSSGYFSSNNRTSLLYVTTAPSSVLNTGKAYIFDVV--GEIVRKLHVFHGEQLGEYFGYSVVAE 301
            .:||...:.:.:   |||..|| ...:|||..||.:.  |.:. .|:..:|:|:|.|:|..:...
Zfish   463 MVSSVVSAHHGQ---LYVAGAP-RFNHTGKVVIFTLTNSGNLT-ILYSLYGKQIGSYYGSELAPI 522

  Fly   302 DLNGDGLTD-VVVSAPLNALGDSYDVGAIYVFI--NKGLFKFEKKIIRLPLSSGARFGSSLSKVG 363
            |::.||||| ::|.||: .....::.|.:|::.  .:|.|..:..:.....|..:|||:::|.:.
Zfish   523 DVDDDGLTDLLLVGAPM-YFYRGWEKGKVYIYTVGLQGSFIPDGTLGPSEHSHDSRFGAAMSALP 586

  Fly   364 DINHDGYNDLAVGAPFAGN--GAVFIFLGSEHGLRDEPSQRLDAPSREPGPYGAHMFGQGLSRGS 426
            |:|.||:::|.||||...|  ||:::|.|.::.::.:..||:......|   |...||:.:....
Zfish   587 DLNGDGFSELVVGAPLEDNHRGAIYLFYGLKNSIQTKYKQRISGIELAP---GLRYFGRSVHGMM 648

  Fly   427 DIDGNGFNDLAIGAPGAEAVYLYRAYPVVKIHATVRSE--------SRAIRPEQETITVTACYRL 483
            |::|:|..||::|:.|| ||.|: :..||::...|..|        ...||..:|...:.|...|
Zfish   649 DLNGDGLVDLSVGSFGA-AVLLW-SRSVVRVGIGVHFEPSKINVFNKDCIRGGREVSCMLATVCL 711

  Fly   484 ETTSKARQMQQQELTFRMTIDELLQRVSFAPM-------RTNEVSFQAQAGLSGSCRNFSVGVHY 541
            ..|::......:.:..|.:..  .:...:.|.       .:.:|:.:..|   ..|:.....||.
Zfish   712 NVTARTPMTDPKRVALRYSFG--FEETGYFPRAVLDSTEESRDVTLRPAA---QHCQQLHFHVHE 771

  Fly   542 TGGIFTPIDLELHYELAKKIPHSHEAFCESCAVVDPLEPKYATGTLSFMTGC-AAHVCV------ 599
            ......|:...::..|.:         .:...|:|...|......|.|..|| ....||      
Zfish   772 VTDYTRPLTFTVNVGLQR---------ADEGPVLDDGWPTSLRSELPFWNGCDNDDQCVPNLILQ 827

  Fly   600 --SDL----QLSSKDVNSSF---------------IFGSLEVLSFSYEITNSGEPAYVAQFNVTS 643
              |||    :..|:|..||:               :..|...:.....:.|.||.||.:..::|.
Zfish   828 SSSDLLDLREFCSRDERSSWPPCVDQSSIKTPERLVESSRRKVVVETHLENRGENAYNSILHITH 892

  Fly   644 SARLPFA----KVPGNCRVRHEVMLCDLNGGRALARGDSESLTIIFDVTQLSGQ----------- 693
            |..|.|:    |.|.:..:.     |..:...:|.|..:.|...:    :.|.|           
Zfish   893 SPNLHFSSLVVKAPSDIAIE-----CPNSDDTSLYRTCNVSAPFM----RASAQVYFRLEFEFSR 948

  Fly   694 -----SLTIEAAVSSAGMDQNPKDNTMSTTISLREYAEIDASGGPIDGHIALK-EYPYSAEV--- 749
                 .:.|...|||.|.:..|:||..:...:||..|::..:.........:| |...|..|   
Zfish   949 SVFLNYVNISLRVSSEGEEMFPEDNVNNIHHNLRYEADLLFTRDSSPSRFEIKPEQAQSVSVGSG 1013

  Fly   750 ---NNSYEFKSHGPSIIDELTVYVDVPIAYTVTGSAGIKSIFNISSLQMQATHGSELVPIKLYDQ 811
               |.||:.::.|...:.||...::|   :.||..|  .::.::|.|.:|...||    :..:.:
Zfish  1014 PPFNLSYQIQNLGLFPVSELLFTLNV---FAVTRKA--NTLLHLSDLYIQQMPGS----LCSFPR 1069

  Fly   812 TNTLAKEYPLEDSSRRANRKRRELQQDQYAIMPDVNISDILTKENLPANRTLVLDCLRGNWTICV 876
            ..|.......||.|..|:.              :.:.||.|.                       
Zfish  1070 VITAGSSSQEEDLSLNAHM--------------NASTSDALL----------------------- 1097

  Fly   877 RSQMRVQLKPEQPIDLRISFKVDLNDFVNTFDYLVIFTNVEMFKEGDSTSIALKRNLKPNVIFNY 941
             :|.|..|.|:..:.:.::      .::|....|.:     .||..|....|.......|.:|.:
Zfish  1098 -AQCRFNLSPQADVSITVT------GWLNLHTLLAV-----KFKRLDLVMTATVELSPSNPMFLH 1150

  Fly   942 SETP---------------LPIWYIILSLIAGHLLLGAMTYILYKLRFFKRGKKEELKRLLEEHR 991
            .|.|               :|:|.||.|.:.|..||..:...|:||.||.|.|:   ||..:|..
Zfish  1151 EERPMRHIILEIRKEEDYRIPVWVIIGSTLGGLQLLALLVLALWKLGFFHRQKR---KRDEQEAN 1212

  Fly   992 SETKE 996
            .:|.|
Zfish  1213 EKTAE 1217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItgaPS5NP_611808.2 VCBS 302..375 CDD:338792 23/75 (31%)
Int_alpha 351..403 CDD:214549 19/53 (36%)
Int_alpha 417..463 CDD:214549 16/45 (36%)
Integrin_alpha2 451..836 CDD:337057 88/454 (19%)
itga11bXP_695559.7 Int_alpha 73..123 CDD:214549 19/55 (35%)
vWA_integrins_alpha_subunit 199..376 CDD:238746 14/176 (8%)
Int_alpha 574..628 CDD:214549 19/53 (36%)
Int_alpha 639..>665 CDD:214549 8/25 (32%)
Integrin_alpha2 671..1071 CDD:312071 83/431 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574926
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23220
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.940

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