DRSC/TRiP Functional Genomics Resources

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Protein Alignment ItgaPS5 and ITGAE

DIOPT Version :9

Sequence 1:NP_611808.2 Gene:ItgaPS5 / 37732 FlyBaseID:FBgn0034880 Length:1018 Species:Drosophila melanogaster
Sequence 2:XP_024306508.1 Gene:ITGAE / 3682 HGNCID:6147 Length:1217 Species:Homo sapiens


Alignment Length:1074 Identity:236/1074 - (21%)
Similarity:392/1074 - (36%) Gaps:279/1074 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 IFVGAPRAQSTLESQGSINETGAVYRCPLASGSCSHYVLNDKLNKQFQWLGGSMDGGTKDTDKLL 122
            :.....|.|: :...||:.:|.:..:..|.|...|.:....|.:|....|   .|||.       
Human   279 VMASLARVQN-ITQVGSVTKTASAMQHVLDSIFTSSHGSRRKASKVMVVL---TDGGI------- 332

  Fly   123 VCAPRFFVPKNK----NYGQMRGICYWVRDTVADTPPLSDVRTISLIPSQAEE------------ 171
                 |..|.|.    |..:|:|:..:......:.......|.::||.|..:|            
Human   333 -----FEDPLNLTTVINSPKMQGVERFAIGVGEEFKSARTARELNLIASDPDETHAFKVTNYMAL 392

  Fly   172 ----------------------HFML-ELGLSAHVTDDNSGFLIGAPGVRSWKGSVLVH-----R 208
                                  |:.| ::|.||.:.|:.. .|:||.|...|.|..|::     |
Human   393 DGLLSKLRYNIISMEGTVGDALHYQLAQIGFSAQILDERQ-VLLGAVGAFDWSGGALLYDTRSRR 456

  Fly   209 GEDLAAQGSYAVKMLDSWDWVKNHFTYVGYALSSGYFSSNNRTSLLYVTTAPSSVLNTGKAYIFD 273
            |..|....:.|.      |.....::|:|||::    ..:...||.|:..|| ...:.|..:...
Human   457 GRFLNQTAAAAA------DAEAAQYSYLGYAVA----VLHKTCSLSYIAGAP-RYKHHGAVFELQ 510

  Fly   274 VVGEIVRKLHVFHGEQLGEYFGYSVVAEDLNGDGLTD-VVVSAPLNALGDSYDV----GAIYVF- 332
            ..|.....|.|..|||:|.|||..:...|::.||.|| ::|:||.      |.|    |.:||: 
Human   511 KEGREASFLPVLEGEQMGSYFGSELCPVDIDMDGSTDFLLVAAPF------YHVHGEEGRVYVYR 569

  Fly   333 --INKGLFKFEKKIIRLPLSSGARFGSSLSKVGDINHDGYNDLAVGAPFAGNGA--------VFI 387
              ...|.|...:.:...|..:.||||.:::.:||::.|...|:|:|||..|.||        |:|
Human   570 LSEQDGSFSLARILSGHPGFTNARFGFAMAAMGDLSQDKLTDVAIGAPLEGFGADDGASFGSVYI 634

  Fly   388 FLGSEHGLRDEPSQRLDAPSREPGPYGAHMFGQGLSRGSDIDGNGFNDLAIGAPGAEAVYLYRAY 452
            :.|...||...||||:.|.:..|   |...||..::.|.||.|:|..|:.:|..|...|  :|:.
Human   635 YNGHWDGLSASPSQRIRASTVAP---GLQYFGMSMAGGFDISGDGLADITVGTLGQAVV--FRSR 694

  Fly   453 PVVKIHATVRSESRAIRPE------QETITVTACYRLETTSKARQMQQQELTFRMTID----ELL 507
            |||::..     |.|..|.      ...:.|..|:.:.:.:.|.:...:|.....|:|    :..
Human   695 PVVRLKV-----SMAFTPSALPIGFNGVVNVRLCFEISSVTTASESGLREALLNFTLDVDVGKQR 754

  Fly   508 QRVSFAPMRTNEVSFQAQAGLSGSCRNFSVGVHY--------TGG------IFTPIDLELHYELA 558
            :|:..:.:|:          ..|..|.:|.|...        |.|      .|:...:::.|:| 
Human   755 RRLQCSDVRS----------CLGCLREWSSGSQLCEDLLLMPTEGELCEEDCFSNASVKVSYQL- 808

  Fly   559 KKIPHSHEAFCESCAVVDPLEPKYATGTLSFMTGCAAHV-CVSDLQLSSKDVNSSFIFGSLEVLS 622
             :.|.......:  .::|.....:|...|.:...|...: ||::|||::.......:.|..:.|:
Human   809 -QTPEGQTDHPQ--PILDRYTEPFAIFQLPYEKACKNKLFCVAELQLATTVSQQELVVGLTKELT 870

  Fly   623 FSYEITNSGEPAYVAQF-------------------NVTSSARLPFAKV-PGNCRVRHEVMLCDL 667
            .:..:|||||.:|:...                   |:......|.|.| ..|||:.|.|:....
Human   871 LNINLTNSGEDSYMTSMALNYPRNLQLKRMQKPPSPNIQCDDPQPVASVLIMNCRIGHPVLKRSS 935

  Fly   668 NGGRALARGDSE----------SLTIIFDVTQLSGQSLTIEAAVSSAGMDQNPKDNTMSTTISLR 722
            .....|.|....          .:::::.:.:.:..:.|.:..|:....::.......:.|:..|
Human   936 VSRFGLIRSSHHPAVGVFCILAHVSVVWQLEENAFPNRTADITVTVTNSNERRSLANETHTLQFR 1000

  Fly   723 EYAEIDASGGPIDGHIALKEYPYSAEVN--------NSYEFKSHGPSIID-ELTVYVDVPIAYTV 778
            .            |.:|:...|....||        ..:.|..||.::.. |..:.:.||     
Human  1001 H------------GFVAVLSKPSIMYVNTGQGLSHHKEFLFHVHGENLFGAEYQLQICVP----- 1048

  Fly   779 TGSAGIKSIFNISSLQMQATHGSELVPIKLYDQTN-----TLAKEYPLEDSSRRANRKRRELQQD 838
                             ....|.::|.:|...:|.     |.::|.....||.:        ..:
Human  1049 -----------------TKLRGLQVVAVKKLTRTQASTVCTWSQERACAYSSVQ--------HVE 1088

  Fly   839 QYAIMPDVNISDILTKENLPANRTLVLDCLRGNWTICVRSQMRVQLKPEQPIDLRISFKVDLNDF 903
            ::..:..|..||   |||:.....:..|          .|:..::...|..|...|||...|.:.
Human  1089 EWHSVSCVIASD---KENVTVAAEISWD----------HSEELLKDVTELQILGEISFNKSLYEG 1140

  Fly   904 VNTFDYLVIFTNVEMFKEGDSTSIALKRNLKPNVIFNYSET--PLPIWYIILSLIAGHLLLGAMT 966
            :|.              |...|.|        .|:|...|.  .|||  ||...:.|.|:|..:.
Human  1141 LNA--------------ENHRTKI--------TVVFLKDEKYHSLPI--IIKGSVGGLLVLIVIL 1181

  Fly   967 YILYKLRFFKRG---------KKEELK--RLLEE 989
            .||:|..||||.         :|.:||  .||||
Human  1182 VILFKCGFFKRKYQQLNLESIRKAQLKSENLLEE 1215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItgaPS5NP_611808.2 VCBS 302..375 CDD:338792 24/80 (30%)
Int_alpha 351..403 CDD:214549 23/59 (39%)
Int_alpha 417..463 CDD:214549 15/45 (33%)
Integrin_alpha2 451..836 CDD:337057 75/453 (17%)
ITGAEXP_024306508.1 vWA_integrins_alpha_subunit 218..395 CDD:238746 25/131 (19%)
Int_alpha 527..578 CDD:214549 18/56 (32%)
Int_alpha 591..650 CDD:214549 23/58 (40%)
Int_alpha 660..>695 CDD:214549 12/36 (33%)
Integrin_alpha2 693..>942 CDD:312071 50/267 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165141987
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23220
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.940

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