DRSC/TRiP Functional Genomics Resources

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Protein Alignment ItgaPS5 and ITGA4

DIOPT Version :10

Sequence 1:NP_611808.2 Gene:ItgaPS5 / 37732 FlyBaseID:FBgn0034880 Length:1018 Species:Drosophila melanogaster
Sequence 2:NP_000876.3 Gene:ITGA4 / 3676 HGNCID:6140 Length:1032 Species:Homo sapiens


Alignment Length:1098 Identity:277/1098 - (25%)
Similarity:449/1098 - (40%) Gaps:272/1098 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 SSYFGYSLVIRPTS----IFVGAPRAQSTLESQGSINETGAVYRC-----------PLASGS--- 90
            ::.||||:|:....    :.||||.|...  :..|:...||:|||           .|..||   
Human    49 NTLFGYSVVLHSHGANRWLLVGAPTANWL--ANASVINPGAIYRCRIGKNPGQTCEQLQLGSPNG 111

  Fly    91 --CSHYVLNDKLNKQFQWLGGSMDGGTKDTDKLLVCAPRF---FVPKNKNYGQMRGICYWVRDTV 150
              |....|.::.|   ||||.::.....:...::.|..|:   |..||:|.....| ||.|    
Human   112 EPCGKTCLEERDN---QWLGVTLSRQPGENGSIVTCGHRWKNIFYIKNENKLPTGG-CYGV---- 168

  Fly   151 ADTPPLSDVRT----------ISLIPSQAEEHFMLELGLSAHVTDDNSGFLIGAPGVRSWKGSVL 205
               ||  |:||          ...:....|.....:.|:|:..|.|.  .::||||...|.||:.
Human   169 ---PP--DLRTELSKRIAPCYQDYVKKFGENFASCQAGISSFYTKDL--IVMGAPGSSYWTGSLF 226

  Fly   206 VHRGEDLAAQGSYAVKMLDSWDWVKNHFTYVGYALSSGYFSSNNRTSLLYVTTAPSSVLNTGKAY 270
            |:.    .....|.. .||..:.|| ..:|:||::.:|:|.|.:.|.:  |..||... ..||||
Human   227 VYN----ITTNKYKA-FLDKQNQVK-FGSYLGYSVGAGHFRSQHTTEV--VGGAPQHE-QIGKAY 282

  Fly   271 IFDVVGEIVRKLHVFHGEQLGEYFGYSVVAEDLNGDGLTDVVVSAPLNALGDSYDVGAIYVFINK 335
            ||.:..:.:..||...|::||.|||.||.|.|||.||.:|::|.||:.:  ...:.|.::|:||.
Human   283 IFSIDEKELNILHEMKGKKLGSYFGASVCAVDLNADGFSDLLVGAPMQS--TIREEGRVFVYINS 345

  Fly   336 G----LFKFEKKIIRLPLSSGARFGSSLSKVGDINHDGYNDLAVGAPFAGN--GAVFIFLGSEHG 394
            |    :...|..::... ...||||.|:..:|||::||:.|:|:|||...:  ||::|:.|...|
Human   346 GSGAVMNAMETNLVGSD-KYAARFGESIVNLGDIDNDGFEDVAIGAPQEDDLQGAIYIYNGRADG 409

  Fly   395 LRDEPSQRLDAPSREPGPYGAHMFGQGLSRGSDIDGNGFNDLAIGAPGAEAVYLYRAYPVVKIHA 459
            :....|||::......   ...||||.:|...|.|.||:.|:|:||..:::..|.|..|||.:.|
Human   410 ISSTFSQRIEGLQISK---SLSMFGQSISGQIDADNNGYVDVAVGAFRSDSAVLLRTRPVVIVDA 471

  Fly   460 TVRSESRAIRPEQE---------TITVTACYRLETTSKARQMQQQ-ELTFRMTIDELLQRVSFAP 514
            ::.......|.:.:         .|.:|.|:    :.|.:::... .|.:.|::|  :.|.:.:|
Human   472 SLSHPESVNRTKFDCVENGWPSVCIDLTLCF----SYKGKEVPGYIVLFYNMSLD--VNRKAESP 530

  Fly   515 MR----TNEVSFQAQAGLSGSCRNFSVGVHY------TGGIFTPIDLELHYELAKKIPH-----S 564
            .|    :|..|......:..|.|..:...|.      ...|.|||.:|..|.|.   ||     |
Human   531 PRFYFSSNGTSDVITGSIQVSSREANCRTHQAFMRKDVRDILTPIQIEAAYHLG---PHVISKRS 592

  Fly   565 HEAFCESCAVVDPLEP--------KYATGTLSFMTGCAAHVCVSDLQLSSK------DVNSSFI- 614
            .|.|       .||:|        .....|::|...||...|.:|||:|:|      ..|.::: 
Human   593 TEEF-------PPLQPILQQKKEKDIMKKTINFARFCAHENCSADLQVSAKIGFLKPHENKTYLA 650

  Fly   615 FGSLEVLSFSYEITNSGEPAYVAQFNVTSSARLPFAKV------PGNCRVRHE--VMLCDLNGGR 671
            .||::.|..:..:.|:|:.||....:|.....|.|.|:      ..||.|...  |:..|.:.|.
Human   651 VGSMKTLMLNVSLFNAGDDAYETTLHVKLPVGLYFIKILELEEKQINCEVTDNSGVVQLDCSIGY 715

  Fly   672 A----LARGDSESLTIIFDVTQLS----GQSLTIEAAVSSAGMDQNPKDNTMSTTISLREYAEID 728
            .    |:|.|   ::.:.||:.||    ..|:|:.|...:.....|.|.:.::..|.|:...:: 
Human   716 IYVDHLSRID---ISFLLDVSSLSRAEEDLSITVHATCENEEEMDNLKHSRVTVAIPLKYEVKL- 776

  Fly   729 ASGGPIDGHIALKEYPYSA------------EVNNSYEFKSHGPSIIDELTVYVDVPIAYTVTGS 781
                .:.|.:....:.|.:            ::|.::...:.|.|:...::|.:.||.::    |
Human   777 ----TVHGFVNPTSFVYGSNDENEPETCMVEKMNLTFHVINTGNSMAPNVSVEIMVPNSF----S 833

  Fly   782 AGIKSIFNISSLQMQATHGSELVPIKLYDQTNTLAKEYPLEDSSRRANRKRRELQQDQYAIMPDV 846
            .....:|||  |.:|.|.|                 |...|:..|..     .|:|.:.|:....
Human   834 PQTDKLFNI--LDVQTTTG-----------------ECHFENYQRVC-----ALEQQKSAMQTLK 874

  Fly   847 NISDILTKENLPANRTLVLDCLRGNWTICVRSQMRVQLKPEQPIDLRISFKVDLNDFVNTFDYLV 911
            .|...|:|.:     ..:|.|::.:                                .:..::|.
Human   875 GIVRFLSKTD-----KRLLYCIKAD--------------------------------PHCLNFLC 902

  Fly   912 IFTNVEMFKEG---------------DSTSIALKRNLK--------PNVI-FNYSET-------- 944
            .|..:|..||.               |.|| |||..::        |.|| .|..|.        
Human   903 NFGKMESGKEASVHIQLEGRPSILEMDETS-ALKFEIRATGFPEPNPRVIELNKDENVAHVLLEG 966

  Fly   945 ---PLPIWYIILSLIAGHLLLG-----AMTYILYKLRFFKRGKKEELKRLLEEHRSET 994
               ..|..|..:.:|:..||||     .::|:::|..||||..|..|:   ||:|.::
Human   967 LHHQRPKRYFTIVIISSSLLLGLIVLLLISYVMWKAGFFKRQYKSILQ---EENRRDS 1021

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItgaPS5NP_611808.2 FG-GAP 294..332 CDD:460357 15/37 (41%)
Int_alpha 351..403 CDD:214549 22/53 (42%)
Int_alpha 417..463 CDD:214549 19/45 (42%)
Integrin_alpha2 453..837 CDD:462478 97/451 (22%)
ITGA4NP_000876.3 FG-GAP 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 35..100 16/52 (31%)
Int_alpha 48..105 CDD:214549 16/57 (28%)
FG-GAP 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 110..177 22/79 (28%)
FG-GAP 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 185..237 14/57 (25%)
FG-GAP 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 238..291 20/56 (36%)
FG-GAP 5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 292..351 25/60 (42%)
Int_alpha 303..352 CDD:214549 21/50 (42%)
FG-GAP 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 355..412 21/57 (37%)
Int_alpha 366..418 CDD:214549 22/51 (43%)
FG-GAP 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 416..478 21/64 (33%)
Int_alpha 428..479 CDD:214549 19/50 (38%)
Integrin_alpha2 464..902 CDD:462478 104/526 (20%)
SG1 606..616 0/9 (0%)
GFFKR motif 1003..1007 2/3 (67%)

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