DRSC/TRiP Functional Genomics Resources

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Protein Alignment ItgaPS5 and ITGA1

DIOPT Version :9

Sequence 1:NP_611808.2 Gene:ItgaPS5 / 37732 FlyBaseID:FBgn0034880 Length:1018 Species:Drosophila melanogaster
Sequence 2:NP_852478.1 Gene:ITGA1 / 3672 HGNCID:6134 Length:1179 Species:Homo sapiens


Alignment Length:1055 Identity:244/1055 - (23%)
Similarity:432/1055 - (40%) Gaps:250/1055 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 TSIFVGAPRAQSTLESQGSINETGAVYRCPLASGSCSHYVLNDKLNKQFQ------------WLG 108
            |::.:...|.::..|::|:  ..|......:.:...||.  |.:|.|..|            .:.
Human   250 TALGIDTARKEAFTEARGA--RRGVKKVMVIVTDGESHD--NHRLKKVIQDCEDENIQRFSIAIL 310

  Fly   109 GSMDGGTKDTDKLLVCAPRFFVPKNKNYGQMRGICYWVRDTVADTPP------LSD-VRTISLIP 166
            ||.:.|...|:|        ||.:.|              ::|..|.      :|| :..::::.
Human   311 GSYNRGNLSTEK--------FVEEIK--------------SIASEPTEKHFFNVSDELALVTIVK 353

  Fly   167 SQAEEHFMLE----------------LGLSAHVTDDNSGFLIGAPGVRSWKGSVLVHRGEDLAAQ 215
            :..|..|.||                .|.|||.:.|  ..::||.|...|.|:|::.:...:...
Human   354 TLGERIFALEATADQSAASFEMEMSQTGFSAHYSQD--WVMLGAVGAYDWNGTVVMQKASQIIIP 416

  Fly   216 GSYAVKMLDSWDWVKNH--FTYVGYALSSGYFSSNNRTSLLYVTTAPSSVLNTGKAYIFDVVGEI 278
            .:....:..:   .||.  .:|:||.::|...||.:   :||:...| ...:||:..|:.:....
Human   417 RNTTFNVEST---KKNEPLASYLGYTVNSATASSGD---VLYIAGQP-RYNHTGQVIIYRMEDGN 474

  Fly   279 VRKLHVFHGEQLGEYFGYSVVAEDLNGDGLTDV-VVSAPLNALGDSYDVGAIYVF-INKGLFKFE 341
            ::.|....|||:|.|||..:...|::.|..||: :|.||:....:..:.|.:||: :|:..|:::
Human   475 IKILQTLSGEQIGSYFGSILTTTDIDKDSNTDILLVGAPMYMGTEKEEQGKVYVYALNQTRFEYQ 539

  Fly   342 KKI--IRLPLSS----------------GARFGSSLSKVGDINHDGYNDLAVGAPFAGN--GAVF 386
            ..:  |:....|                |||||::::.|.|:|.||:||:.:|||...:  |||:
Human   540 MSLEPIKQTCCSSRQHNSCTTENKNEPCGARFGTAIAAVKDLNLDGFNDIVIGAPLEDDHGGAVY 604

  Fly   387 IFLGSEHGLRDEPSQRLDAPSREPGPYGAHMFGQGLSRGSDIDGNGFNDLAIGAPGAEAVYLYRA 451
            |:.||...:|.|.:||:  ||...|. ....|||.:....|::|:|..|:.||..|..|::..|.
Human   605 IYHGSGKTIRKEYAQRI--PSGGDGK-TLKFFGQSIHGEMDLNGDGLTDVTIGGLGGAALFWSRD 666

  Fly   452 YPVVKIHATVRSESRAIRPE--------QETITV--TACYRLETTSKARQMQQQELTFRMTIDEL 506
            ..|||:  |:..|...:..:        :||:.:  |.|:.::..||...:.:.:|.:|:|:|.|
Human   667 VAVVKV--TMNFEPNKVNIQKKNCHMEGKETVCINATVCFDVKLKSKEDTIYEADLQYRVTLDSL 729

  Fly   507 LQ--RVSFAPMRTNEVSFQAQAGLSGSCRNFSV-GVHYTGGIFTPID---------LELHYELAK 559
            .|  |..|:..:..:|.           ||.:| ....|...|..:|         :.|.:.|..
Human   730 RQISRSFFSGTQERKVQ-----------RNITVRKSECTKHSFYMLDKHDFQDSVRITLDFNLTD 783

  Fly   560 KIPHSHEAFCESCAVVDPLEPKYATGTLSFMTGCA-AHVCVSDLQL----SSKDV------NSSF 613
            .         |:..|:|...|......:.|...|. ...|:|||.|    :.||:      |..|
Human   784 P---------ENGPVLDDSLPNSVHEYIPFAKDCGNKEKCISDLSLHVATTEKDLLIVRSQNDKF 839

  Fly   614 IFGSLEVLSFSYEITNSGEPAYVAQFNVTSSARLPFAKVPG----NCRVRHEVMLCDLNGGRALA 674
                    :.|..:.|:.:.||..:..|..|..|.|:.:..    :|...|.: .|.: |...|.
Human   840 --------NVSLTVKNTKDSAYNTRTIVHYSPNLVFSGIEAIQKDSCESNHNI-TCKV-GYPFLR 894

  Fly   675 RGDSESLTIIFDV-TQLSGQSLTIEAAVSSAGMDQNPK---DNTMSTTISLREYAEIDASGGPID 735
            ||:..:..|:|.. |....:::||..:.:| ..::.|:   ||.::.:|             |:.
Human   895 RGEMVTFKILFQFNTSYLMENVTIYLSATS-DSEEPPETLSDNVVNISI-------------PVK 945

  Fly   736 GHIALKEYPYSAEVNNSYEFKSHGPSIIDEL-TVYVDVPIAYTVTGSAGIKSIFNISSLQMQATH 799
            ..:.|:.|..::|.:.|.......|.:|:.. .:..::.|.|.:..|..    |.:..|::..:.
Human   946 YEVGLQFYSSASEYHISIAANETVPEVINSTEDIGNEINIFYLIRKSGS----FPMPELKLSISF 1006

  Fly   800 GSELVPIKLYDQTNTLAKEYPL-----EDSSRRANRKRRELQQDQYAIMPDVNISDILTKENLPA 859
                        .|..:..||:     ..||..|| .|..:.:|.::|    |....:|......
Human  1007 ------------PNMTSNGYPVLYPTGLSSSENAN-CRPHIFEDPFSI----NSGKKMTTSTDHL 1054

  Fly   860 NRTLVLDC-------LRGNWTICVRSQMRVQL---KPEQPIDLRISFKVDLNDFVNTFDYLVIFT 914
            .|..:|||       :..|.|....||:.|.|   ||               .|:.::     |:
Human  1055 KRGTILDCNTCKFATITCNLTSSDISQVNVSLILWKP---------------TFIKSY-----FS 1099

  Fly   915 NVEMFKEG----DSTSIAL-KRNLKPNVIFNYSETPL----PIWYIILSLIAGHLLLGAMTYILY 970
            ::.:...|    ::.|:.| ..|.|..:....|:..|    |:|.|:||..||.|||..:...|:
Human  1100 SLNLTIRGELRSENASLVLSSSNQKRELAIQISKDGLPGRVPLWVILLSAFAGLLLLMLLILALW 1164

  Fly   971 KLRFFKRGKKEELKR 985
            |:.||||..|:::::
Human  1165 KIGFFKRPLKKKMEK 1179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItgaPS5NP_611808.2 VCBS 302..375 CDD:338792 26/92 (28%)
Int_alpha 351..403 CDD:214549 25/69 (36%)
Int_alpha 417..463 CDD:214549 16/45 (36%)
Integrin_alpha2 451..836 CDD:337057 88/431 (20%)
ITGA1NP_852478.1 FG-GAP 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 30..91
FG-GAP 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 101..160
vWA_integrins_alpha_subunit 171..351 CDD:238746 23/126 (18%)
FG-GAP 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 365..417 11/53 (21%)
FG-GAP 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 422..475 14/59 (24%)
Int_alpha 434..474 CDD:214549 12/43 (28%)
FG-GAP 5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 476..538 20/61 (33%)
Int_alpha 486..>529 CDD:214549 13/42 (31%)
FG-GAP 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 557..615 21/57 (37%)
Int_alpha 568..621 CDD:214549 24/52 (46%)
FG-GAP 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 619..679 22/64 (34%)
Integrin_alpha2 664..1056 CDD:285619 93/458 (20%)
GFFKR motif 1167..1171 2/3 (67%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165142004
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23220
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.940

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