DRSC/TRiP Functional Genomics Resources

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Protein Alignment ItgaPS5 and ITGA6

DIOPT Version :10

Sequence 1:NP_611808.2 Gene:ItgaPS5 / 37732 FlyBaseID:FBgn0034880 Length:1018 Species:Drosophila melanogaster
Sequence 2:NP_001381857.1 Gene:ITGA6 / 3655 HGNCID:6142 Length:1130 Species:Homo sapiens


Alignment Length:1218 Identity:279/1218 - (22%)
Similarity:456/1218 - (37%) Gaps:335/1218 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LLFLIFLALKYQSNAMNFSPLPNRVIDAPKHLKTRMIQVRSSYFGYSLV----IRPTS---IFVG 61
            ||:|....|.....|.|.....:.||        |......|.||:||.    ::|..   :.||
Human     9 LLYLSAGLLSRLGAAFNLDTREDNVI--------RKYGDPGSLFGFSLAMHWQLQPEDKRLLLVG 65

  Fly    62 APRAQSTLESQGSINETGAVYRCPL-ASGSCSHYVLNDKL-----NKQFQWLGGSMD----GGTK 116
            ||||:: |..|.: |.||.:|.|.: |.|.|:....::..     :|:.||:|.::.    ||  
Human    66 APRAEA-LPLQRA-NRTGGLYSCDITARGPCTRIEFDNDADPTSESKEDQWMGVTVQSQGPGG-- 126

  Fly   117 DTDKLLVCAPRFFVPKNKNYGQ----MRGICYWVRDTVADTPPLS-------DVRTISLIPSQAE 170
               |::.||.|:...::.|..|    :.|.||.:...:.....:.       |.|.      :..
Human   127 ---KVVTCAHRYEKRQHVNTKQESRDIFGRCYVLSQNLRIEDDMDGGDWSFCDGRL------RGH 182

  Fly   171 EHF-MLELGLSAHVTDDNSGFLIGAPGVRSWKGSVLVHRGE------DLAAQGSYAV-------- 220
            |.| ..:.|::|..|.|....:.||||..:|||.|.|.:..      ::...|.|.|        
Human   183 EKFGSCQQGVAATFTKDFHYIVFGAPGTYNWKGIVRVEQKNNTFFDMNIFEDGPYEVGGETEHDE 247

  Fly   221 -----------------------------------KMLDSW-DWVKNHFTYVGYALSSGYFSSNN 249
                                               :..|:: |.:.|  :|:|::|.||. ...:
Human   248 SLVPVPANSYLGLLFLTSVSYTDPDQFVYKTRPPREQPDTFPDVMMN--SYLGFSLDSGK-GIVS 309

  Fly   250 RTSLLYVTTAPSSVLNTGKAYIF---DVVGEIVRKLHVFHGEQLGEYFGYSVVAEDLNGDGLTDV 311
            :..:.:|:.||.:  |...|.:.   |:....:...|:|.||.|...|||.|...|||.||..|:
Human   310 KDEITFVSGAPRA--NHSGAVVLLKRDMKSAHLLPEHIFDGEGLASSFGYDVAVVDLNKDGWQDI 372

  Fly   312 VVSAPLNALGDSYDVGAIYVFINKGLFKFEKKIIRLPLSSGARFGSSLSKVGDINHDGYNDLAVG 376
            |:.||.....|....||:||::|:.......|.|||..:..:.||.::..:||||.|||.|:|||
Human   373 VIGAPQYFDRDGEVGGAVYVYMNQQGRWNNVKPIRLNGTKDSMFGIAVKNIGDINQDGYPDIAVG 437

  Fly   377 APFAGNGAVFIFLGSEHGLRDEPSQRLDAPSREPGPYGAHMFGQGLSRGSDIDGNGFNDLAIGAP 441
            ||:...|.|||:.||.:|:..:|:|.|...|    ||    ||..::...|:|.|.:.|:|:|:.
Human   438 APYDDLGKVFIYHGSANGINTKPTQVLKGIS----PY----FGYSIAGNMDLDRNSYPDVAVGSL 494

  Fly   442 GAEAVYLYRAYPVVKIHATVRSESRAIRPEQET---------ITVTACYR--------------- 482
             :::|.::|:.||:.|..|:......|...|:|         :.|.:|:.               
Human   495 -SDSVTIFRSRPVINIQKTITVTPNRIDLRQKTACGAPSGICLQVKSCFEYTANPAGYNPSISIV 558

  Fly   483 --LETTSKAR------------QMQQQELTFRMTIDELLQRVSFAPMRTNEVSFQAQAGLSGSCR 533
              ||...:.|            |..:.:.|..:|:....|:|..      |.:...|..:....|
Human   559 GTLEAEKERRKSGLSSRVQFRNQGSEPKYTQELTLKRQKQKVCM------EETLWLQDNIRDKLR 617

  Fly   534 NFSVGVHYTGGIFTPIDLELHYELAKKIPHSH---EAFCESCAVVDPLEPKYATGTLSFM-TGCA 594
                          ||.:....|:.:  |.|.   .:..|...:::..|||.|...:.|: .||.
Human   618 --------------PIPITASVEIQE--PSSRRRVNSLPEVLPILNSDEPKTAHIDVHFLKEGCG 666

  Fly   595 -AHVCVSDLQLSSKDVNSSFIFGSLEVLSFSYEITNSGEPAYVAQFNVTSSARLPFAKVPGNCR- 657
             .:||.|:|:|..|.....   |:.:  .|||.....|.|..|.:.....:..:.....|.|.| 
Human   667 DDNVCNSNLKLEYKFCTRE---GNQD--KFSYLPIQKGVPELVLKDQKDIALEITVTNSPSNPRN 726

  Fly   658 ------VRHEVML------------------------------------CDLNGGRALARGDSES 680
                  ..||..|                                    |:|  |....|..:.:
Human   727 PTKDGDDAHEAKLIATFPDTLTYSAYRELRAFPEKQLSCVANQNGSQADCEL--GNPFKRNSNVT 789

  Fly   681 LTIIFDVTQLSGQSLTIEAAVSSAGMDQNPK-------DNTMSTTISLREYAEIDAS-------- 730
            ..::...|         |....:..:|.|.|       ||....|...:...|:..|        
Human   790 FYLVLSTT---------EVTFDTPDLDINLKLETTSNQDNLAPITAKAKVVIELLLSVSGVAKPS 845

  Fly   731 ----GGPIDGHIALKEYPYSAEVNN--SYEFKSHGPSIIDELTVYVDVPIAYTVTGSAGI---KS 786
                ||.:.|..|:|.   ..||.:  .|||:          .:.:..|:....|.:..|   |.
Human   846 QVYFGGTVVGEQAMKS---EDEVGSLIEYEFR----------VINLGKPLTNLGTATLNIQWPKE 897

  Fly   787 IFN---ISSLQMQATHGSELVPIKLYDQTNTLAKEYPLEDSSRRANRKRRELQQDQYAIMPDVNI 848
            |.|   :..|....:.|.|.|..:...:.|:|    .|.:|..  :||:||              
Human   898 ISNGKWLLYLVKVESKGLEKVTCEPQKEINSL----NLTESHN--SRKKRE-------------- 942

  Fly   849 SDILTKENLPANRTLVLDCLRGNWTI-CVRSQMRVQLK-PEQPIDLRISFKVDLNDFVNTF---- 907
               :|::.:..||...|...|...|: |..:...|.:: |.:.:|.:.|..:....:.:||    
Human   943 ---ITEKQIDDNRKFSLFAERKYQTLNCSVNVNCVNIRCPLRGLDSKASLILRSRLWNSTFLEEY 1004

  Fly   908 ---DYLVIF-----------TNVEMFKEGDSTSIALKRNLKPNVIFNYSETPLPIWYIILSLIAG 958
               :||.|.           .|:.:...|....:.:   .....:..||  .:|.|.|:::::||
Human  1005 SKLNYLDILMRAFIDVTAAAENIRLPNAGTQVRVTV---FPSKTVAQYS--GVPWWIILVAILAG 1064

  Fly   959 HLLLGAMTYILYKLRFFKRGKKEE------LKRLLEEHRSETKEPATD 1000
            .|:|..:.:||:|..||||.:.::      ..|:.:|.|....|...|
Human  1065 ILMLALLVFILWKCGFFKRSRYDDSVPRYHAVRIRKEEREIKDEKYID 1112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItgaPS5NP_611808.2 FG-GAP 294..332 CDD:460357 17/37 (46%)
Int_alpha 351..403 CDD:214549 24/51 (47%)
Int_alpha 417..463 CDD:214549 14/45 (31%)
Integrin_alpha2 453..837 CDD:462478 94/496 (19%)
ITGA6NP_001381857.1 FG-GAP 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 30..95 24/74 (32%)
Int_alpha 40..100 CDD:214549 22/61 (36%)
FG-GAP 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 101..166 15/69 (22%)
FG-GAP 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 176..229 17/58 (29%)
FG-GAP 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 283..339 14/60 (23%)
Int_alpha 293..345 CDD:214549 12/56 (21%)
FG-GAP 5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 340..402 24/61 (39%)
Int_alpha 353..406 CDD:214549 20/52 (38%)
FG-GAP 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 403..458 26/54 (48%)
Int_alpha 413..464 CDD:214549 24/50 (48%)
FG-GAP 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 459..518 20/67 (30%)
Int_alpha 470..>493 CDD:214549 8/26 (31%)
Integrin_alpha2 504..978 CDD:462478 102/547 (19%)
Interaction with HPS5 1077..1083 3/5 (60%)
GFFKR motif 1079..1083 2/3 (67%)

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