DRSC/TRiP Functional Genomics Resources

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Protein Alignment ItgaPS5 and Itga11

DIOPT Version :10

Sequence 1:NP_611808.2 Gene:ItgaPS5 / 37732 FlyBaseID:FBgn0034880 Length:1018 Species:Drosophila melanogaster
Sequence 2:NP_001400722.1 Gene:Itga11 / 315744 RGDID:1311711 Length:1188 Species:Rattus norvegicus


Alignment Length:1300 Identity:294/1300 - (22%)
Similarity:444/1300 - (34%) Gaps:478/1300 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SNAMNFSPLPNRVIDAPKHLKTRMIQVRSSYFGYSLVIRPTS----IFVGAPRAQSTLESQGSIN 76
            ::..|......|||..|.          :::|||::.....|    :.||||     ||:.|. .
  Rat    20 TDTFNMDTRNPRVIAGPS----------AAFFGYTVQQHDISGKKWLVVGAP-----LETNGH-Q 68

  Fly    77 ETGAVYRCPLASGSCSHYVLNDKLN------------KQFQWLGGSMDGGTKDTDKLLVCAP--- 126
            :||.||:||:..|:|:      |||            |....||.|:....||: ..|.|:|   
  Rat    69 KTGDVYKCPVTQGNCT------KLNLGRVTLSNVSERKDNMRLGLSLATNPKDS-SFLACSPLWS 126

  Fly   127 --------------------RF---FVP-----------------KNKNY--------------- 136
                                ||   ..|                 .|..|               
  Rat   127 HECGSSYYTTGMCSRVNSNFRFSKTVAPALQRCQTYMDIVIVLDGSNSIYPWVEVQHFLIEILTK 191

  Fly   137 -----GQMR-GICYW---------------VRDTVA----------------------------- 151
                 ||:: ||..:               |:|.|.                             
  Rat   192 FYIGPGQIQVGIVQYGEDAVHEFHLNDYKSVKDVVEAASHIEQRGGTETRTAFGIEFARSEAFQK 256

  Fly   152 -------------------DTPPLSDV-------------------------------RTISLIP 166
                               |:|.|..|                               ..|..|.
  Rat   257 GGRKGAKKVMIVITDGESHDSPDLEKVIRQSEKDNVTRYAVAVLGYYNRRGINPETFLNEIKYIA 321

  Fly   167 SQAEE-HF------------------------------------MLELGLSAHVTDDNSGFLIGA 194
            |..:: ||                                    |.:.|.|:||.:|  |.|:||
  Rat   322 SDPDDKHFFNVTDEAALKDIVDALGDRIFSLEGTNKNETSFGLEMSQTGFSSHVVED--GVLLGA 384

  Fly   195 PGVRSWKGSVL--VHRGEDLAAQGSYAVKMLDSWDWVKNHFTYVGYALSSGYFSSNNRTSLLYVT 257
            .|...|.|:||  ...|:.:..:.||..:..:.   :|||..|:||.::|...|...|   :||.
  Rat   385 VGAYDWNGAVLKETSAGKVIPLRESYLKEFPEE---LKNHAAYLGYTVTSVVSSKQGR---VYVA 443

  Fly   258 TAPSSVLNTGKAYIFDVVGEIVRKLH-VFHGEQLGEYFGYSVVAEDLNGDGLTDV-VVSAPLNAL 320
            .|| ...:|||..:|.:.......:| ...|||:|.|||..:.:.|:|.|.:||| :|.||: ..
  Rat   444 GAP-RFNHTGKVILFSIHTNRSLTIHQALRGEQIGSYFGSEITSVDINNDRVTDVLLVGAPM-YF 506

  Fly   321 GDSYDVGAIYVF-INKGLFKFEKKIIRLPLSSGARFGSSLSKVGDINHDGYNDLAVGAPF--AGN 382
            .:..:.|.:||: :.:..|.|...:........|||||.::.|.|:|.|.|||:.||||.  :..
  Rat   507 SEGRERGKVYVYNLRQNRFVFNGTLKDSHSYQNARFGSCIASVQDLNQDSYNDVVVGAPLEDSHR 571

  Fly   383 GAVFIFLGSEHGLRDEPSQRLDAPSREPG--PYGAHMFGQGLSRGSDIDGNGFNDLAIGAPGAEA 445
            ||::||.|.:..:..:|.||:.|....||  .:|..:.||     .|::.:|..|||:||.| .|
  Rat   572 GAIYIFHGFQTNILKKPVQRISASELAPGLQHFGCSIHGQ-----LDLNEDGLVDLAVGALG-NA 630

  Fly   446 VYLYRAYPVVKIHATVRSESRAIR----------------------------PEQETITVTACYR 482
            |.|: |.|||:|:|::..|...|.                            |...|.||...|.
  Rat   631 VVLW-ARPVVQINASLHFEPSKINIFHKDCKRNGRDATCLAAFLCFGPIFLAPHFHTATVGIRYN 694

  Fly   483 LETTSKARQMQQQELTFRMTIDELLQRVSFAPMRTNEVSFQAQAGLSGS--CRNFSVGVHYTGGI 545
             .|..:.|.|.      |..:||      .|...||.....:    ||.  |:..:..|..|...
  Rat   695 -ATMDERRYMP------RAHLDE------GADQFTNRAVLLS----SGQEHCQRINFHVLDTADY 742

  Fly   546 FTPIDLELHYELAKKIPHSHEAFCESCAVVDPLEPKYATGTLSFMTGC--AAHVCVSDLQLSSK- 607
            ..|:...:.|.|...         :...::|...|.....::.|..||  ..| ||.||.|.:: 
  Rat   743 VKPVAFSVEYSLEDP---------DHGPMLDNGWPTTLRVSVPFWNGCNEDEH-CVPDLVLDARS 797

  Fly   608 ------------------DVNSSFIFGSLEVLSFSYEIT-----------NSGEPAYVAQFNVTS 643
                              |.:|..:  |.:...|..|.|           |.||.||.|..|::.
  Rat   798 DLPTAMEYCQQVLRRPAQDCSSYTL--SFDTTVFIIESTRRRVAVEATLENRGENAYSAVLNISQ 860

  Fly   644 SARLPFAK-------------VPGNCRVRHEVMLCDLN------GGRALARGDSESLTIIFDVTQ 689
            |..|.||.             |....|:..:|  |:::      ..:...|.|.|....:|    
  Rat   861 SENLQFASLIQKDDSDNSIECVNEERRLHKKV--CNVSYPFFRAKAKVAFRLDFEFSKSVF---- 919

  Fly   690 LSGQSLTIEAAVSSAGMDQNPKDNTMSTTISLREYAEI------DASGGPIDGHIALKEY----- 743
            |....:.:.|...|...|....|||......|:..|::      ..|...:..:.:|:.|     
  Rat   920 LHHLQIHLGAGSDSHEQDSTADDNTALLRFHLKYEADVLFTRSSSLSHFEVKANSSLESYDGIGP 984

  Fly   744 PYSA--EVNNSYEFKSHGPSIIDELTVYVDVPIAYTVTGSAGIKSIFNISSLQMQATHGSELVPI 806
            |::.  :|.|...|..||      :.:.:.||||                     ...|:.|:.:
  Rat   985 PFNCVFKVQNLGFFPIHG------VMMKITVPIA---------------------TRGGNRLLML 1022

  Fly   807 KLY--DQTNTL------AKEY---PLEDSSRRANRKRRELQQDQYAIMPDVNISDILTKENLPAN 860
            |.:  ||.||.      :.||   |.|:....| .:|.....|..:|:.:|.::        |..
  Rat  1023 KDFFTDQVNTSCNIWGNSTEYRSTPTEEDLSHA-PQRNHSNSDVVSIICNVRLA--------PNQ 1078

  Fly   861 RTLVLDCLRGN-WTICVRSQMRVQLKPEQPIDLRISFKVDLN-----DFVNTFDYLVIFTNVEMF 919
            .|...  |.|| |.:.:::     ||..       |.|:.:|     .|.:.|          :|
  Rat  1079 ETSFY--LVGNLWLMSLKA-----LKYR-------SMKITVNAALQRQFHSPF----------IF 1119

  Fly   920 KEGDSTSIALKRNLKPNVIFNYS---ETPLPIWYIILSLIAGHLLLGAMTYILYKLRFFKRGKKE 981
            :|.|.:.         .|.|..|   :..:|||.|:.|.:.|.|||..:...|:||.|||..|::
  Rat  1120 REEDPSR---------QVTFEISKQEDWQVPIWIIVGSSLGGLLLLALLVLALWKLGFFKSAKRK 1175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItgaPS5NP_611808.2 FG-GAP 294..332 CDD:460357 13/38 (34%)
Int_alpha 351..403 CDD:214549 23/53 (43%)
Int_alpha 417..463 CDD:214549 19/45 (42%)
Integrin_alpha2 453..837 CDD:462478 100/488 (20%)
Itga11NP_001400722.1 Int_alpha 37..86 CDD:214549 19/70 (27%)
vWA_integrins_alpha_subunit 163..341 CDD:238746 18/177 (10%)
Int_alpha 476..523 CDD:214549 16/47 (34%)
Int_alpha 538..592 CDD:214549 23/53 (43%)
Integrin_alpha2 636..1064 CDD:462478 100/490 (20%)

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