DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ItgaPS5 and Itgax

DIOPT Version :10

Sequence 1:NP_611808.2 Gene:ItgaPS5 / 37732 FlyBaseID:FBgn0034880 Length:1018 Species:Drosophila melanogaster
Sequence 2:NP_067309.1 Gene:Itgax / 16411 MGIID:96609 Length:1169 Species:Mus musculus


Alignment Length:961 Identity:237/961 - (24%)
Similarity:355/961 - (36%) Gaps:288/961 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 PSQAEEHFMLEL---GLSAHVTDDNSGFLIGAPGVRSWKGSVLVH-------------RGEDLAA 214
            ||.:.  |.||:   |.||..|.|  |.::||.|..||.|...::             ..||   
Mouse   343 PSSST--FELEMSQEGFSAVFTPD--GPVLGAVGSFSWSGGAFLYPSNMRPTFINMSQENED--- 400

  Fly   215 QGSYAVKMLDSWDWVKNHFTYVGYALSSGYFSSNNRTSLLYVTTAPSSVL------NTGKAYIFD 273
                   |.|:         |:||:           |:|.:.....|.:|      :|||..||.
Mouse   401 -------MRDA---------YLGYS-----------TALAFWKGVHSLILGAPRHQHTGKVVIFT 438

  Fly   274 VVGEIVRKLHVFHGEQLGEYFGYSVVAEDLNGDGLTDVVV----------------SAPLNALGD 322
            ......|......|.|:|.|||.|:.:.|::.||.||:|:                ..|:..:|.
Mouse   439 QESRHWRPKSEVRGTQIGSYFGASLCSVDMDRDGSTDLVLIGVPHYYEHTRGGQVSVCPMPGVGS 503

  Fly   323 SYDVGAIYVFINKGLFKFEKKIIRLPLSSG---ARFGSSLSKVGDINHDGYNDLAVGAP--FAGN 382
            .:..|.                 .|....|   .|||::|:.:||:|.|...|:|:|||  ....
Mouse   504 RWHCGT-----------------TLHGEQGHPWGRFGAALTVLGDVNGDSLADVAIGAPGEEENR 551

  Fly   383 GAVFIFLG-SEHGLRDEPSQRLDA---PSREPGPYGAHMFGQGLSRGSDIDGNGFNDLAIGAPGA 443
            |||:||.| |...:...||||:.|   |||      ...|||.||.|.|:..:|..|||:|:.| 
Mouse   552 GAVYIFHGASRQDIAPSPSQRISASQIPSR------IQYFGQSLSGGQDLTRDGLVDLAVGSKG- 609

  Fly   444 EAVYLYRAYPVVK----IHATVRSESRA-------IRPEQETITVTACYRLETTSKARQMQ-QQE 496
             .|.|.|..|:::    :|.|....||:       :.|||.....|.|..:..:.|.:... :..
Mouse   610 -RVLLLRTRPILRVSPTVHFTPAEISRSVFECQEQVAPEQTLSDATVCLHIHESPKTQLGDLRST 673

  Fly   497 LTFRMTID--ELLQRVSFAPMRTNEVSFQAQAGLSGSCRNFSVGVHYTGGI---FTPIDLELHYE 556
            :||.:.:|  .|..|..|...:|..::.....||:..|.  ||.:.....:   .|||.|.|::.
Mouse   674 VTFDLALDHGRLSTRAIFKETKTRALTRVKTLGLNKHCE--SVKLLLPACVEDSVTPITLRLNFS 736

  Fly   557 LAKKIPHSHEAFCESCAVVDPLEPKYATGTLSFMTGCAA-HVCVSDLQL--SSKDVNSSFIFGSL 618
            |. .:|.|.....:....||  :..|.|.:|.|...|.| |:|..||.:  ...|:.:..:...|
Mouse   737 LV-GVPISSLQNLQPMLAVD--DQTYFTASLPFEKNCGADHICQDDLSVVFGFPDLKTLVVGSDL 798

  Fly   619 EVLSFSYEITNSGEPAYVAQFNVTSSARLPFAKV-PGNC------------RVRHEV-MLCDLNG 669
            | |:....::|.||.:|.....:.....|.|.:| .|..            |.:|.: ::||...
Mouse   799 E-LNVDVTVSNDGEDSYGTTVTLFYPVGLSFRRVAEGQVFLRKKEDQQWQRRGQHSLHLMCDSTP 862

  Fly   670 GRA-------------LARGDSE-SLTIIFDVTQLS--GQSLTIEAAVSSAGMDQNPKDNTMSTT 718
            .|:             :.||.|: :..:.|||:..:  |..|.:.|.|.|    :|....|..||
Mouse   863 DRSQGLWSTSCSSRHVIFRGGSQMTFLVTFDVSPKAELGDRLLLRARVGS----ENNVPGTPKTT 923

  Fly   719 ISLREYAEIDASGGPIDGHIALKEYPYSAEVNNSYEFKSHGPSIIDELTVYVDVPIAYTVTGSAG 783
            ..|                    |.|....|...  ..||     |:.|.|::...:.....|. 
Mouse   924 FQL--------------------ELPVKYAVYTM--ISSH-----DQFTKYLNFSTSEKEKTSV- 960

  Fly   784 IKSIFNISSLQMQATHGS--ELVPIKLYDQT----------NTLAKEYPLEDSSRRANRKRRELQ 836
            ::..|.:::|..:....|  ..|||:|..:.          |.|.:.|            |..|:
Mouse   961 VEHRFQVNNLGQRDVPVSINFWVPIELKGEAVWTVMVSHPQNPLTQCY------------RNRLK 1013

  Fly   837 QDQYAIMPDVNISDILTKENLPANRTLVLDC------------------------LRGN----WT 873
            ..|:         |:||.    ..::.||||                        |:||    | 
Mouse  1014 PTQF---------DLLTH----MQKSPVLDCSIADCLHLRCDIPSLGILDELYFILKGNLSFGW- 1064

  Fly   874 ICVRSQMRVQLKPEQPIDLRISFKVDLNDFVNTFDYLVIFTNVEMFKEGDSTSIALKRNLKPNVI 938
            |....|.:|.|..|..|               ||       |..::.:.......|:...|..:.
Mouse  1065 ISQTLQKKVLLLSEAEI---------------TF-------NTSVYSQLPGQEAFLRAQTKTVLE 1107

  Fly   939 FNYSETPLPIWYIILSLIAGHLLLGAMTYILYKLRFFKRGKKEELKRLLEE 989
            ......|:|:  |:.|.:.|.|||..:|.||||..||||    :.|.:|||
Mouse  1108 MYKVHNPVPL--IVGSSVGGLLLLAIITAILYKAGFFKR----QYKEMLEE 1152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItgaPS5NP_611808.2 FG-GAP 294..332 CDD:460357 12/53 (23%)
Int_alpha 351..403 CDD:214549 24/57 (42%)
Int_alpha 417..463 CDD:214549 19/49 (39%)
Integrin_alpha2 453..837 CDD:462478 97/445 (22%)
ItgaxNP_067309.1 FG-GAP 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 23..78
FG-GAP 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 79..138
vWA_integrins_alpha_subunit 151..326 CDD:238746
FG-GAP 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 341..392 17/52 (33%)
FG-GAP 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 393..444 16/80 (20%)
FG-GAP 5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 445..505 16/59 (27%)
Int_alpha 455..505 CDD:214549 13/49 (27%)
FG-GAP 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 508..566 23/74 (31%)
Int_alpha 518..573 CDD:214549 23/54 (43%)
FG-GAP 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 571..631 25/67 (37%)
Integrin_alpha2 617..1041 CDD:462478 105/486 (22%)
Integrin_alpha 1138..1152 CDD:459778 7/17 (41%)
GFFKR motif 1140..1144 2/3 (67%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.