DRSC/TRiP Functional Genomics Resources

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Protein Alignment ItgaPS5 and Itgav

DIOPT Version :9

Sequence 1:NP_611808.2 Gene:ItgaPS5 / 37732 FlyBaseID:FBgn0034880 Length:1018 Species:Drosophila melanogaster
Sequence 2:NP_032428.2 Gene:Itgav / 16410 MGIID:96608 Length:1044 Species:Mus musculus


Alignment Length:1126 Identity:268/1126 - (23%)
Similarity:456/1126 - (40%) Gaps:293/1126 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 SYFGYSL-VIRPTS-----IFVGAPRAQSTLESQGSINETGAVYRCPLASG-SCS---------- 92
            ||||::: ...|::     :.||||:|.:|   |..|.|.|.|.:|..:|. .|.          
Mouse    47 SYFGFAVDFFEPSTSSRMFLLVGAPKANTT---QPGIVEGGQVLKCECSSSRRCQPIEFDSTGNR 108

  Fly    93 HYVLNDKLN-KQFQWLGGSMDGGTKDTDKLLVCAPRF-FVPKNKNYGQMRGICYWVRDTVADTPP 155
            .|..:|.|. |..||.|.|:   ....||:|.|||.: :..:.|...:..|.|:           
Mouse   109 DYAKDDPLEFKSHQWFGASV---RSKQDKILACAPLYHWRTEMKQEREPVGTCF----------- 159

  Fly   156 LSD-VRTISLIPSQAEEHFMLELGLSAHVTDDNSGF---------------LIGAPGVRSWKGSV 204
            |.| .:|:...|.:           |.::..|..||               |:|.||...|:|.:
Mouse   160 LQDGTKTVEYAPCR-----------SKNIDADGQGFCQGGFSIDFTKADRVLLGGPGSFYWQGQL 213

  Fly   205 LVHRGEDLAAQ---GSYAVK------------MLDSWDWVKNHFTYVGYALSSGYFSSNNRTSLL 254
            :..:..::.::   ..|::|            :.|.        :|:||:::.|.|:.:....  
Mouse   214 ISDQVAEIISKYDPNVYSIKYNNQLATRTAQAIFDD--------SYLGYSVAVGDFNGDGIED-- 268

  Fly   255 YVTTAPSSVLNTGKAYIFDVVGEIVRKLHVFHGEQLGEYFGYSVVAEDLNGDGLTDVVVSAPL-- 317
            :|:..|.:....|..||:|  |:.:..||.|.|||:..|||:||.|.|:|||...||.:.|||  
Mouse   269 FVSGVPRAARTLGMVYIYD--GKNMSSLHNFTGEQMAAYFGFSVAATDINGDDYADVFIGAPLFM 331

  Fly   318 --NALGDSYDVGAIYVFINKGLFKFEKKIIRLPLSSG----ARFGSSLSKVGDINHDGYNDLAVG 376
              .:.|...:||.:.|.:.:.:..|:...:     :|    |||||:::.:||::.||:||:|:.
Mouse   332 DRGSDGKLQEVGQVSVSLQRAVGDFQTTKL-----NGFEVFARFGSAIAPLGDLDQDGFNDIAIA 391

  Fly   377 APFAG---NGAVFIFLGSEHGLRDEPSQRLD----APSREPGPYGAHMFGQGLSRGSDIDGNGFN 434
            ||:.|   .|.|:||.|...||...|||.|:    |.|..|.      ||..:...:|:|.||:.
Mouse   392 APYGGEDKKGLVYIFNGRSTGLNSVPSQILEGQWAAQSMPPS------FGYSMKGATDVDRNGYP 450

  Fly   435 DLAIGAPGAEAVYLYRAYPVVKIHA------TVRSESRAIRPEQETITVTACYRLETTSKA--RQ 491
            ||.:||.|.:...||||.|||.::|      ::.::...|.|...|....:|:.:....||  :.
Mouse   451 DLVVGAFGVDRAVLYRARPVVTVNAGLEVYPSILNQDNKICPLPGTALKVSCFNVRFCLKADGKG 515

  Fly   492 MQQQELTFR--MTIDELLQRVSF---------APMRTNEVS-FQAQAGLSGSCRNFSVGVHYTGG 544
            ...::|.|:  :.:|:|.|:.:.         :|:.:..:: |:   |....|......:.....
Mouse   516 TLPRKLHFQVELLLDKLKQKGAIRRALFLHNRSPVHSKTMTVFR---GGQMQCEELVAYLRDESE 577

  Fly   545 I---FTPIDLELHYELAKKIPHSHEAFCESCAVVDPLEPKYATGTLS----FMTGCAA-HVCVSD 601
            .   .|||.:.:.|.|.::.       ......:.|:..::....:|    .:..|.. :||...
Mouse   578 FRDKLTPITIFMEYRLDQRT-------AADATGLQPILNQFTPANVSRQAHILLDCGEDNVCKPK 635

  Fly   602 LQLSSKDVNSSFIFGSLEVLSFSYEITNSGEPAYVAQFNVTSSARLPFAKVPGN--------CRV 658
            |::|..........|....|:.:.:..|.||.||.|:..|:...:..|..|..|        |..
Mouse   636 LEVSVNSDQKKIYIGDDNPLTLTVKAQNQGEGAYEAELIVSIPPQADFIGVVRNNEALARLSCAF 700

  Fly   659 RHE----VMLCDLNGGRALARGDSESLTIIFDVTQLS--GQSLTIEAAVSSAGMDQNPKDN---T 714
            :.|    .::|||  |..:..|......:.|.|.|.|  ..|:..:..:.|:    |..||   .
Mouse   701 KTENQTRQVVCDL--GNPMKAGTQLLAGLRFSVHQQSEMDTSVKFDLKIQSS----NSFDNVSPV 759

  Fly   715 MSTTISLREYAEIDASGGPIDGHIAL-------KEYPYSAE-----VNNSYEFKSHGPSIIDELT 767
            :|..:.|...|.::..|.....||.|       ||.|.:.|     |.:.||.:::|||...:..
Mouse   760 VSYKVDLAVLAAVEIRGVSSPDHIFLPIPNWEYKENPETEEDVGPIVQHIYELRNNGPSSFSKAI 824

  Fly   768 VYVDVPIAYTVTGSAGIKSIFNISSL----------QMQATHGSELVPIKLYDQTNTLAKEYPLE 822
            :.:..|..|            |.::|          .|..|..:|:.|:::         :.|.:
Mouse   825 LNLQWPYKY------------NNNTLLYILHYDIDGPMNCTADTEINPLRI---------KTPEK 868

  Fly   823 DSSRRANRKRRELQQDQYAIMPDVNISDILTKENLPAN----RTL---VLDCLRGNWTICVRSQM 880
            :.:..|.:..|               :.::||.:|...    .||   :..||          |:
Mouse   869 NDTAAAGQGER---------------NHLITKRDLTLREGDVHTLGCGIAKCL----------QI 908

  Fly   881 RVQLKPEQPIDLRISFKVDLNDFVNTFDYLVIFTNVEMFKEGDSTSIALKRNLKPNVI-FNYSET 944
            ..|:.           ::|.......:...:::|...|.||..:.|.:||.:...|:| |.|...
Mouse   909 TCQVG-----------RLDRGKSAILYVKSLLWTETFMNKENQNHSYSLKSSASFNIIEFPYKNL 962

  Fly   945 PL------------------------PIWYIILSLIAGHLLLGAMTYILYKLRFFKRGKKEELKR 985
            |:                        |:|.|||:::||.|||..:.:::|::.||||.:..:   
Mouse   963 PIEDLFNSTLVTTNITWGIQPAPMPVPVWVIILAVLAGLLLLAVLVFVMYRMGFFKRVRPPQ--- 1024

  Fly   986 LLEEHRSETKEPATDCEGNQE 1006
              ||...|..:|..:.|||.|
Mouse  1025 --EEQEREQLQPHENGEGNSE 1043

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItgaPS5NP_611808.2 VCBS 302..375 CDD:338792 26/80 (33%)
Int_alpha 351..403 CDD:214549 26/58 (45%)
Int_alpha 417..463 CDD:214549 19/51 (37%)
Integrin_alpha2 451..836 CDD:337057 88/451 (20%)
ItgavNP_032428.2 FG-GAP 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 32..98 18/53 (34%)
Int_alpha 46..103 CDD:214549 19/58 (33%)
FG-GAP 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 109..170 20/74 (27%)
WD40 repeat 126..183 CDD:293791 16/81 (20%)
FG-GAP 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 173..225 10/62 (16%)
WD40 repeat 188..248 CDD:293791 8/59 (14%)
FG-GAP 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 237..291 13/65 (20%)
Int_alpha 248..>288 CDD:214549 12/51 (24%)
WD40 repeat 254..298 CDD:293791 12/47 (26%)
FG-GAP 5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 292..357 25/64 (39%)
Int_alpha 302..355 CDD:214549 19/52 (37%)
WD40 repeat 307..362 CDD:293791 18/59 (31%)
FG-GAP 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 358..415 23/61 (38%)
Int_alpha 367..421 CDD:214549 25/53 (47%)
WD40 repeat 371..422 CDD:293791 22/50 (44%)
FG-GAP 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 419..482 24/68 (35%)
Int_alpha 434..476 CDD:214549 18/41 (44%)
Integrin_alpha2 467..910 CDD:285619 96/504 (19%)
GFFKR motif 1015..1019 2/3 (67%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1023..1044 8/26 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167832017
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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