DRSC/TRiP Functional Genomics Resources

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Protein Alignment ItgaPS5 and Itga1

DIOPT Version :10

Sequence 1:NP_611808.2 Gene:ItgaPS5 / 37732 FlyBaseID:FBgn0034880 Length:1018 Species:Drosophila melanogaster
Sequence 2:NP_001028400.2 Gene:Itga1 / 109700 MGIID:96599 Length:1179 Species:Mus musculus


Alignment Length:1043 Identity:238/1043 - (22%)
Similarity:418/1043 - (40%) Gaps:226/1043 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 TSIFVGAPRAQSTLESQGSINETGAVYRCPLASGSCSHY----VLNDKLNKQFQWLG----GSMD 112
            |::.:...|.::..|::|:......|........|..:|    |:.|..::..|...    |..:
Mouse   250 TALGIDTARKEAFTEARGARRGVKKVMVIVTDGESHDNYRLKQVIQDCEDENIQRFSIAILGHYN 314

  Fly   113 GGTKDTDKLLVCAPRFFVPKNKNYGQMRGICYWVRDTVADTPP------LSD-VRTISLIPSQAE 170
            .|...|:|        ||.:.|              ::|..|.      :|| :..::::.:..|
Mouse   315 RGNLSTEK--------FVEEIK--------------SIASEPTEKHFFNVSDELALVTIVKALGE 357

  Fly   171 EHFMLE----------------LGLSAHVTDDNSGFLIGAPGVRSWKGSVLVHRGEDLAAQGSYA 219
            ..|.||                .|.|||.:.|  ..::||.|...|.|:|::.:...:....:..
Mouse   358 RIFALEATADQSAASFEMEMSQTGFSAHYSQD--WVMLGAVGAYDWNGTVVMQKANQIVIPHNTT 420

  Fly   220 -----VKMLDSWDWVKNHFTYVGYALSSGYFSSNNRTSLLYVTTAPSSVLNTGKAYIFDVVGEIV 279
                 .||.:..      .:|:||.::|.....:    :||:...| ...:||:..|:.:....|
Mouse   421 FQTEPTKMNEPL------ASYLGYTVNSATIPGD----VLYIAGQP-RYNHTGQVVIYKMEDGDV 474

  Fly   280 RKLHVFHGEQLGEYFGYSVVAEDLNGDGLTD-VVVSAPLNALGDSYDVGAIYVF-INKGLFKFEK 342
            ..|....|||:|.|||..:...|::.|..|| ::|.||:....:..:.|.:||: :|:..|:::.
Mouse   475 NILQTLSGEQIGSYFGSVLTTIDIDKDSYTDLLLVGAPMYMGTEKEEQGKVYVYAVNQTRFEYQM 539

  Fly   343 KI--IRLPLSS----------------GARFGSSLSKVGDINHDGYNDLAVGAPFAGN--GAVFI 387
            .:  |:....|                |||||::::.|.|:|.||:||:.:|||...:  |||:|
Mouse   540 SLEPIKQTCCSSLKDNSCTKENKNEPCGARFGTAVAAVKDLNVDGFNDVVIGAPLEDDHAGAVYI 604

  Fly   388 FLGSEHGLRDEPSQRLDAPSREPGPYGAHMFGQGLSRGSDIDGNGFNDLAIGAPGAEAVYLYRAY 452
            :.||...:|.|.:||:  ||...|. ....|||.:....|::|:|..|:.||..|..|::..|..
Mouse   605 YHGSGKTIRKEYAQRI--PSGGDGK-TLKFFGQSIHGEMDLNGDGLTDVTIGGLGGAALFWARDV 666

  Fly   453 PVVKIHAT-----VRSESRAIRPE-QETITV--TACYRLETTSKARQMQQQELTFRMTIDELLQ- 508
            .|||:...     |..:.:..|.| :||:.:  |.|:.::..||...:.:.:|.:|:|:|.|.| 
Mouse   667 AVVKVTMNFEPNKVNIQKKNCRVEGKETVCINATMCFHVKLKSKEDSVYEADLQYRVTLDSLRQI 731

  Fly   509 -RVSFAPMRTNEVSFQAQAGLSGSCRN--FSVGVH-YTGGIFTPIDLELHYELAKKIPHSHEAFC 569
             |..|:..:...:........|...|:  :.:..| :...:...:|..|             ...
Mouse   732 SRSFFSGTQERRIQRNLTVRESECIRHSFYMLDKHDFQDSVRVTLDFNL-------------TDP 783

  Fly   570 ESCAVVDPLEPKYATGTLSFMTGCA-AHVCVSDLQL--SSKDVNSSFIFGSLEVLSFSYEITNSG 631
            |:..|:|...|....|.:.|...|. ...|||||.|  |:.:.|...:....:..:.|..:.|.|
Mouse   784 ENGPVLDDALPNSVHGHIPFAKDCGNKERCVSDLTLDVSTTEKNLLIVRSQNDKFNVSLTVKNKG 848

  Fly   632 EPAYVAQFNVTSSARLPFAKVPG------------NCRVRHEVMLCDLNGGRALARGDSESLTII 684
            :.||..:..|..|..|.|:.:..            .|||          |...|..||..:..||
Mouse   849 DSAYNTRTVVQYSPNLIFSGIEEIQKDSCESNQNITCRV----------GYPFLRTGDVVNFKII 903

  Fly   685 --FDVTQLSGQSLTIEAAVSSAGMDQNP----KDNTMSTTISLREYAEIDASGGPIDGHIALKEY 743
              |:.:.||..::...:|.|.:   :.|    .||.::.:|             |:...:.|:.|
Mouse   904 FQFNTSHLSENAIIHLSATSDS---EEPLESLYDNEVNISI-------------PVKYEVGLQFY 952

  Fly   744 PYSAEVNNSYEFKSHGPSII-------DELTVYVDVPIAYTVTGSAGIKSIFNISSLQMQATHGS 801
            ..::|.:.|.......|.:|       ||:.|:      ||:..    :..|.:..|::..:.  
Mouse   953 SSASEHHISVAANETVPELINSTKDIGDEINVF------YTIRK----RGHFPMPELRLAISF-- 1005

  Fly   802 ELVPIKLYDQTNTLAKEYPL-----EDSSRRANRKRRELQQDQYAI----MPDVNISDILTKENL 857
                      .|..:..||:     ..||...|.:.|.| :|...|    ...::.|::|     
Mouse  1006 ----------PNLTSDGYPVLYPTGWSSSDNVNCRPRSL-EDPLGINSGKKMTISKSEVL----- 1054

  Fly   858 PANRTLVLDCLRGNWTICVRSQMRVQLKPEQPIDLRISFKVDLNDFVNT-FDYLVIFTNVEMFKE 921
              .|..:.||     :.|..:.:...|.|.....:.:|..:....|:.. |..|.:....|:..|
Mouse  1055 --KRGTIQDC-----STCKIATITCHLLPSDVSQVNVSLILWKPTFIKAHFSSLNLTIRGELQSE 1112

  Fly   922 GDSTSIALKRNLKPNVIFNYSETPL----PIWYIILSLIAGHLLLGAMTYILYKLRFFKRGKKEE 982
            ..|.::: ..|.|..:....|:..|    |:|.|:||..||.|||..:...|:|:.||||..|::
Mouse  1113 NSSLTLS-SSNRKRELAIQISKDGLPGRVPLWVILLSAFAGLLLLMLLILALWKIGFFKRPLKKK 1176

  Fly   983 LKR 985
            :::
Mouse  1177 MEK 1179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItgaPS5NP_611808.2 FG-GAP 294..332 CDD:460357 11/38 (29%)
Int_alpha 351..403 CDD:214549 25/69 (36%)
Int_alpha 417..463 CDD:214549 16/50 (32%)
Integrin_alpha2 453..837 CDD:462478 89/429 (21%)
Itga1NP_001028400.2 FG-GAP 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 30..91
FG-GAP 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 101..160
vWA_integrins_alpha_subunit 171..351 CDD:238746 21/122 (17%)
FG-GAP 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 365..417 11/53 (21%)
FG-GAP 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 422..474 12/62 (19%)
FG-GAP 5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 475..537 20/61 (33%)
Int_alpha 485..>528 CDD:214549 13/42 (31%)
FG-GAP 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 556..614 21/57 (37%)
Int_alpha 567..620 CDD:214549 24/52 (46%)
FG-GAP 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 618..678 20/62 (32%)
Integrin_alpha2 664..1044 CDD:462478 92/441 (21%)
GFFKR motif 1167..1171 2/3 (67%)
Blue background indicates that the domain is not in the aligned region.

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