DRSC/TRiP Functional Genomics Resources

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Protein Alignment ItgaPS5 and itgam.1

DIOPT Version :10

Sequence 1:NP_611808.2 Gene:ItgaPS5 / 37732 FlyBaseID:FBgn0034880 Length:1018 Species:Drosophila melanogaster
Sequence 2:XP_005156064.3 Gene:itgam.1 / 101882585 ZFINID:ZDB-GENE-110411-175 Length:1136 Species:Danio rerio


Alignment Length:1262 Identity:263/1262 - (20%)
Similarity:428/1262 - (33%) Gaps:453/1262 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 SPLPNRVIDAPKHLKTRMIQVRSSYFGYSLVIRP-TSIFVGAPRAQSTLESQGSIN--ETGAVYR 83
            :||.|.|.                 |||.::... |.:.|..|..|        ||  |.|.:|.
Zfish    34 APLTNNVA-----------------FGYKVIQEDMTRLTVSDPLIQ--------INRDERGQIYS 73

  Fly    84 CPLASGSCSHY-----VLNDKLNKQFQWLGGSMDGGTKD--TDKLLVCAPRFFVPKN-KNYGQMR 140
            |.:..|:||..     |.::.:|..   ||.||   .||  :.||:||.|.  :||| .......
Zfish    74 CDVNRGTCSSLNIYGRVPSEAVNMS---LGLSM---VKDPGSSKLVVCGPT--IPKNCPGVSTYN 130

  Fly   141 GICYWVRDTVADTPPL-SDVRTISLIPSQAEEHFMLELGLSAHVTDDNS---------------- 188
            |:|:......:.|.|: |.:|...  .||.:..|:|:...|....|.|.                
Zfish   131 GMCFVNEHRRSFTGPIPSSLRECP--KSQIDIAFLLDGSGSVDPVDFNKMKAFVVEMIKSFIDRD 193

  Fly   189 --------------------------------------GFLIGAPGVRSWKGSVLVHRGEDLAAQ 215
                                                  |:...|..:|....|:.|..|.  |.|
Zfish   194 TQFAIAQFSTECVIHYKFQQVKNPAWWQRAVNGIQQTHGWTFTATAIRLLVESLFVSSGG--ARQ 256

  Fly   216 GS-------------------------------YAV----------------------------K 221
            .:                               ||:                            |
Zfish   257 SASKILVVITDGESNDKFLTEAVQQAQEKSITRYAIGVGNAFNKYSARNELTVIASIPTDKHVFK 321

  Fly   222 MLD-----------------------SWDWVKNHFTYVGY--ALSS----------------GY- 244
            :.|                       |.|..:..|...|:  ||:|                || 
Zfish   322 VTDFDALESIREILKENIIAIEGTQTSGDSSRMEFAQDGFSAALTSDTDLIMTAVGAFQWKGGYQ 386

  Fly   245 -FSSNNRTSL----------LYVTTAPSSVLNTGKAYIFDVVGEIVRKLHVFHG----------- 287
             |..|::||:          |..:.|.::|.||..|    |:|   ...|...|           
Zfish   387 LFKLNDQTSVFQAGSEHNSYLGYSLAIATVYNTKYA----VMG---APRHKHEGLVTVTRIDRMS 444

  Fly   288 ---------EQLGEYFGYSVVAEDLNGDGLTD-VVVSAPLNALGDSYDVGAIYVFINKGLFKFEK 342
                     .|:|.|||..|...|||.|..|| ::||||.....:......:|.:..:..|.|..
Zfish   445 DQIQLDPPKTQIGSYFGAEVCVVDLNSDSNTDLLLVSAPTYTESEREGKVFVYSYTRRPFFSFSD 509

  Fly   343 KIIRLPLSSGARFGSSLSKVGDINHDGYNDLAVGAPFA--GNGAVFIFLGSEHGLRDEPSQRLDA 405
            .::........||||||:...|:|.||:.|:.||||..  |.|:::||.|.:.|:....|||:..
Zfish   510 VVLVGMAGQRGRFGSSLASPADLNGDGFKDVLVGAPLEEDGKGSIYIFNGRDGGIISSYSQRIAG 574

  Fly   406 PSREPGPYGAHMFGQGLSRGS-DIDGNGFNDLAIGAPGAEAVYLYRAYPVVKIHATVRSESRAIR 469
            .|.:.   |...||..||:.| |...:...|:|:|:.|  ||.|.|:.|::.:...|......|.
Zfish   575 SSVQS---GLQYFGVSLSQSSPDQTADSLPDIAVGSKG--AVLLLRSRPIMLLETKVSYNPSKIS 634

  Fly   470 ------PEQETITVTACYRLETTSKARQMQQQELTFRMTIDELLQ-RVSFAPMRTNEVSFQAQAG 527
                  ..|...|:..|:.::.....::....::|:.:|:|...| ..:|...:.|.:|.....|
Zfish   635 TGHTDCKNQLQTTLIVCFTMKGYRHHKRDLNAKITYNITLDAKRQNHRAFFSAKDNLLSNVIDIG 699

  Fly   528 LSGSCRNFSVGVHYTGGIFTPIDLELHYELAKKIPHSHEAFCESCA--VVDPLE----------- 579
            .:..|:|                              |:...|:|.  .::||.           
Zfish   700 NTEVCKN------------------------------HDFLIEACPEDALNPLSNQLKFTFEGLP 734

  Fly   580 ------------PKYATGT---LSFMTGCAA-HVCVSDLQLSSKDVNSSFI-FGSLEVLSFSYEI 627
                        |:..|.:   |.|...|.. :|||.:|::......|:.| .|.::.::.:..:
Zfish   735 SSQMQNLRPILLPEIKTTSDHDLDFERECGKDNVCVDNLRVDFNFSGSTNIEVGIMQEINVTVFV 799

  Fly   628 TNSGEPAYVAQFNVTSSARLPFAKVPGNCRVRHEVMLCDLNGGRALARGDSE----------SLT 682
            .|.||.:|...|.:.......:.::...   :..|....|:|.:.:..|::|          :..
Zfish   800 ENRGENSYNTHFTLNYPYGFSYRRITSK---QGRVECSSLDGEQGVRLGETECAISKPILKDNTK 861

  Fly   683 IIFDVTQ------LSGQSLTIEAAVSSAGMDQNPKDNTMSTTISLREYAEIDASGGPIDGHIALK 741
            |:|::|.      ..||::...|:|.| |.|::.:.:.:|...|      ||...|.   ::||.
Zfish   862 IVFEITYSINKEVTLGQNVIFSASVKS-GNDKHSESSELSKKKS------IDVKYGI---YVALI 916

  Fly   742 EYPYSA-EVNNSYEFKSHGPSIIDELTVYVDV-PIAYTVTGSAGIKSIFNISSLQMQATHGSELV 804
            .:..|. .:|.:...|.....:...:.:..|: |:|:|    |.|:                  |
Zfish   917 RHENSTIHINFTSGKKDLSKPVQQTIKIENDLRPLAFT----AFIR------------------V 959

  Fly   805 PIKLYDQTNTLAKEYPLEDSSRRANRKRRELQQDQYAIMPDV-NISDILTKENLPANRTLVLDCL 868
            |:||.|  ..:.||..|:.|....|:..:          |.| |..|.:.|.:       ||:| 
Zfish   960 PLKLGD--TDIWKESTLQVSDCVKNKTEK----------PSVTNYMDDIKKHH-------VLNC- 1004

  Fly   869 RGNWTIC---------VRSQMRV----------------------QLKPEQPIDLRISFKVDL-N 901
              :..:|         ::::.::                      :|.....:|..:|..|.. :
Zfish  1005 --SVAVCAVFICDVNLIKNERKLYNITGNVSSAWIEQTGLKSAVFELVSTTTMDYDMSTYVFFSS 1067

  Fly   902 DFVNTFDYLVIFTNVEMFKEGDSTSIALKRNLKPNVIFNYSETPLPIWYIILSLIAGHLLLGAMT 966
            |..||...|.|.|.||:::|.|.|.                       .||..:|.|.:||..:|
Zfish  1068 DSRNTAPSLQISTQVEVYEEVDLTK-----------------------EIIGGVIGGLVLLALIT 1109

  Fly   967 YILYKLRFFKRGKKEELKRLLEEHRSE 993
            ..|||..||    |.:.|:::||.:.|
Zfish  1110 AALYKAGFF----KSQYKQMMEEAQGE 1132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItgaPS5NP_611808.2 FG-GAP 294..332 CDD:460357 14/38 (37%)
Int_alpha 351..403 CDD:214549 23/53 (43%)
Int_alpha 417..463 CDD:214549 16/46 (35%)
Integrin_alpha2 453..837 CDD:462478 79/438 (18%)
itgam.1XP_005156064.3 None

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