Sequence 1: | NP_611808.2 | Gene: | ItgaPS5 / 37732 | FlyBaseID: | FBgn0034880 | Length: | 1018 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005156064.1 | Gene: | itgam.1 / 101882585 | ZFINID: | ZDB-GENE-110411-175 | Length: | 1136 | Species: | Danio rerio |
Alignment Length: | 1262 | Identity: | 263/1262 - (20%) |
---|---|---|---|
Similarity: | 428/1262 - (33%) | Gaps: | 453/1262 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 22 SPLPNRVIDAPKHLKTRMIQVRSSYFGYSLVIRP-TSIFVGAPRAQSTLESQGSIN--ETGAVYR 83
Fly 84 CPLASGSCSHY-----VLNDKLNKQFQWLGGSMDGGTKD--TDKLLVCAPRFFVPKN-KNYGQMR 140
Fly 141 GICYWVRDTVADTPPL-SDVRTISLIPSQAEEHFMLELGLSAHVTDDNS---------------- 188
Fly 189 --------------------------------------GFLIGAPGVRSWKGSVLVHRGEDLAAQ 215
Fly 216 GS-------------------------------YAV----------------------------K 221
Fly 222 MLD-----------------------SWDWVKNHFTYVGY--ALSS----------------GY- 244
Fly 245 -FSSNNRTSL----------LYVTTAPSSVLNTGKAYIFDVVGEIVRKLHVFHG----------- 287
Fly 288 ---------EQLGEYFGYSVVAEDLNGDGLTD-VVVSAPLNALGDSYDVGAIYVFINKGLFKFEK 342
Fly 343 KIIRLPLSSGARFGSSLSKVGDINHDGYNDLAVGAPFA--GNGAVFIFLGSEHGLRDEPSQRLDA 405
Fly 406 PSREPGPYGAHMFGQGLSRGS-DIDGNGFNDLAIGAPGAEAVYLYRAYPVVKIHATVRSESRAIR 469
Fly 470 ------PEQETITVTACYRLETTSKARQMQQQELTFRMTIDELLQ-RVSFAPMRTNEVSFQAQAG 527
Fly 528 LSGSCRNFSVGVHYTGGIFTPIDLELHYELAKKIPHSHEAFCESCA--VVDPLE----------- 579
Fly 580 ------------PKYATGT---LSFMTGCAA-HVCVSDLQLSSKDVNSSFI-FGSLEVLSFSYEI 627
Fly 628 TNSGEPAYVAQFNVTSSARLPFAKVPGNCRVRHEVMLCDLNGGRALARGDSE----------SLT 682
Fly 683 IIFDVTQ------LSGQSLTIEAAVSSAGMDQNPKDNTMSTTISLREYAEIDASGGPIDGHIALK 741
Fly 742 EYPYSA-EVNNSYEFKSHGPSIIDELTVYVDV-PIAYTVTGSAGIKSIFNISSLQMQATHGSELV 804
Fly 805 PIKLYDQTNTLAKEYPLEDSSRRANRKRRELQQDQYAIMPDV-NISDILTKENLPANRTLVLDCL 868
Fly 869 RGNWTIC---------VRSQMRV----------------------QLKPEQPIDLRISFKVDL-N 901
Fly 902 DFVNTFDYLVIFTNVEMFKEGDSTSIALKRNLKPNVIFNYSETPLPIWYIILSLIAGHLLLGAMT 966
Fly 967 YILYKLRFFKRGKKEELKRLLEEHRSE 993 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ItgaPS5 | NP_611808.2 | VCBS | 302..375 | CDD:338792 | 24/73 (33%) |
Int_alpha | 351..403 | CDD:214549 | 23/53 (43%) | ||
Int_alpha | 417..463 | CDD:214549 | 16/46 (35%) | ||
Integrin_alpha2 | 451..836 | CDD:337057 | 79/439 (18%) | ||
itgam.1 | XP_005156064.1 | vWFA | 158..331 | CDD:294047 | 17/174 (10%) |
Int_alpha | 456..>498 | CDD:214549 | 15/41 (37%) | ||
Int_alpha | 520..572 | CDD:214549 | 23/51 (45%) | ||
Integrin_alpha2 | 616..>908 | CDD:285619 | 57/331 (17%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170574957 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR23220 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.940 |