DRSC/TRiP Functional Genomics Resources

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Protein Alignment ItgaPS5 and itgae.2

DIOPT Version :9

Sequence 1:NP_611808.2 Gene:ItgaPS5 / 37732 FlyBaseID:FBgn0034880 Length:1018 Species:Drosophila melanogaster
Sequence 2:XP_003200076.2 Gene:itgae.2 / 100536705 ZFINID:ZDB-GENE-130530-671 Length:1098 Species:Danio rerio


Alignment Length:1016 Identity:230/1016 - (22%)
Similarity:395/1016 - (38%) Gaps:285/1016 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 TSIFVGAPRAQSTLESQGSINETGAVYRCPLASGSCSHYVLNDKLNKQFQWLG------GSMDGG 114
            |.||:....:::..|....:...|.:...|:        .|::.|||. |..|      |..||.
Zfish   269 TDIFIPENGSKNNSEKIIIVLSDGKILGDPM--------TLDEVLNKT-QMKGVTRYSIGVGDGI 324

  Fly   115 TKDTDKL----LVCAPRFFVPKNKNYGQMRGICYWVRDTVADTPPLSDVRTISLIPSQAEEH-FM 174
            .|:.|.:    .:..|..:...: :||.:..|             ||.:.. .:|.::..:| |.
Zfish   325 LKNKDAIKEMTQIADPGKYYSVS-SYGALNDI-------------LSSLER-GIIGTEGTQHGFK 374

  Fly   175 LEL---GLSAHV--TDDNSGFLIGAPGVRSWKGSVLVHRGEDLAAQGSYAVKML-DSWDWVKNHF 233
            |:|   |.|:|:  .:.....|.||.|...|.|.|.:..|.        .||.| ||.:..|  |
Zfish   375 LQLAEAGFSSHLLYNEQKVEALFGAVGAYDWSGGVFLKSGN--------TVKFLNDSHNETK--F 429

  Fly   234 TYVGYALSSGYFSSNNRTSLLYVTTAPSSVLNTGKAYIFDVVGEIVRKLHVFHGEQLGEYFGYSV 298
            .|:||:::|.:..|..    ||::.||...| ||..:|||.:     :.:|.||:|:|.|||..:
Zfish   430 GYLGYSVTSAHLPSKT----LYISGAPRYNL-TGAVFIFDGL-----EKYVLHGDQVGSYFGSVL 484

  Fly   299 VAEDLNGDGLTD-VVVSAP---LNALGDSYDVGAIYVFINKGLFKFEKKIIRLPLSSG---ARFG 356
            .|.|:|.|..|| ::|.||   ||.     :.|.:.|:......:||:..:.|...:|   ||||
Zfish   485 CALDINKDEHTDHLLVGAPHFHLNG-----EEGKVLVYKLNQEDRFERAPVELRGDAGQTFARFG 544

  Fly   357 SSLSKVGDINHDGYNDLAVGAPF--AGNGAVFIFLGSEHGLRDEPSQRLDAPSREPGPYGAHM-- 417
            :::..:|||:::.:||:|||||.  ...|:|:|:.|.|.|||.  ||::     .|..:|..:  
Zfish   545 AAIGSIGDIDNNKFNDVAVGAPLETGSAGSVYIYSGFEEGLRF--SQKI-----SPSDFGMKLVY 602

  Fly   418 FGQGLSRG----SDIDGNGFNDLAIGAPGAEAVYLYRAYPVVKIHATVRSESRAIR--------P 470
            |||.:|.|    |||.     .:|:|:.|  .|.::...||:.|..|::.::..|.        .
Zfish   603 FGQSVSVGPAPASDIP-----CIAVGSLG--RVSVFETIPVLIIEPTIKIDTEVIALTHQMNKIS 660

  Fly   471 EQETITVTACYRLETTS-KARQMQQQELTFRMTID------------ELLQRVSFAPMRTNEVSF 522
            .:.::.:|.|:.::... ||.:.:.|.:.:.:.:|            :.|.:.:|......|   
Zfish   661 SELSMKITVCFNIKKGKLKAEKSETQAVDYEIDLDSGASKKRLTCGADSLIKDTFTLTPDEE--- 722

  Fly   523 QAQAGLSGSCRNFSVGVHYTG--GIFTPIDLELHYELAKKIPHSHEAFCESCAVVDPLEPKYATG 585
                     |.|..  :.|.|  ..|:||.::|.:.||.   :.:||   ...::|...|.....
Zfish   723 ---------CTNKK--LTYLGCFDCFSPIKIKLSFSLAS---NKNEA---PIRILDAFTPTEVVK 770

  Fly   586 TLSFMTGCAAHVCVSDLQLSSKDVNSSFI-FGSLEVLSFSYEITNSGEPAYVAQFNVTSSARLPF 649
            .:.|...|.|..|...:.||...::.:.| .|..:.|:.::..||:|:|:|.....:|..:.|..
Zfish   771 EIPFEKDCQAADCKPSITLSDSKISETTITMGETQNLNINFNFTNTGDPSYKTTLTLTYPSILSE 835

  Fly   650 AKVPG-----------NCRVRHEVMLCDLNGGRALARGDSESLTIIFDVTQLSGQSLTIEAAVSS 703
            .|:.|           .|.::|.|.             ...:.|.:|...||:.:|         
Zfish   836 RKIEGAACPVKNDNQIQCHLQHPVF-------------TRSAQTNLFISWQLNDKS--------- 878

  Fly   704 AGMDQNPKDNTMSTTISLREYAEIDASGGPIDGHIALKEYPYSAEVNNSYEFKSHGPSIIDE--- 765
                                               .||:    :|:..:...:::|..::|.   
Zfish   879 -----------------------------------DLKK----SEIIANLTSQNNGIQLLDSRIY 904

  Fly   766 -LTVYVDVPIAYTVTGSAGIKSIFNISSLQMQATHGSELVPIKLYDQTNTLAKEYPLEDSSRRAN 829
             ..|...:||  .:.|||      ..:.|:::.....:..|||.                     
Zfish   905 TFNVMYFLPI--LIRGSA------EPNILRIEEGGKGKTQPIKF--------------------- 940

  Fly   830 RKRRELQQDQYAIMPDVNISDILTKENLPANRTLVLDCLRGNWTICVRSQMRVQ---------LK 885
             |.:...:::|....||.|:..:.......:.|.:..      .:||....:|:         ||
Zfish   941 -KIQFQGENKYGATIDVIITIKMDTSKTDLHITKIQP------EVCVLEANKVKEASYIYKCTLK 998

  Fly   886 PEQPIDLRISFKVDLNDFVNTFDYLVIFTNVEMFKEG----DSTSIALKRNLKPNVIFNYSETPL 946
            ..|.|  .|...|.::|..:|.:.:::        ||    |.|..:.|..:|...:    |.|:
Zfish   999 ELQII--TIEANVFIHDVQDTSEKIIV--------EGQYSYDETLYSAKDTIKSFTL----EVPV 1049

  Fly   947 PIWYIILS-------LIAGHLLLGAMTYILYKLRFFKRGKK 980
            ....::.|       .|.|.|.|.....||.|..||:|..|
Zfish  1050 TKMQVMTSKGPIIGGSIGGFLFLLIFIIILIKCGFFRRRHK 1090

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItgaPS5NP_611808.2 VCBS 302..375 CDD:338792 25/79 (32%)
Int_alpha 351..403 CDD:214549 25/56 (45%)
Int_alpha 417..463 CDD:214549 16/51 (31%)
Integrin_alpha2 451..836 CDD:337057 70/423 (17%)
itgae.2XP_003200076.2 vWFA 180..355 CDD:320736 20/95 (21%)
Int_alpha 429..>465 CDD:214549 15/40 (38%)
Int_alpha 477..>517 CDD:214549 16/44 (36%)
Int_alpha 540..589 CDD:214549 22/50 (44%)
Integrin_alpha2 635..>922 CDD:312071 65/375 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574900
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23220
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.940

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