DRSC/TRiP Functional Genomics Resources

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Protein Alignment ItgaPS5 and itgae.2

DIOPT Version :10

Sequence 1:NP_611808.2 Gene:ItgaPS5 / 37732 FlyBaseID:FBgn0034880 Length:1018 Species:Drosophila melanogaster
Sequence 2:XP_003200076.2 Gene:itgae.2 / 100536705 ZFINID:ZDB-GENE-130530-671 Length:1098 Species:Danio rerio


Alignment Length:1016 Identity:230/1016 - (22%)
Similarity:395/1016 - (38%) Gaps:285/1016 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 TSIFVGAPRAQSTLESQGSINETGAVYRCPLASGSCSHYVLNDKLNKQFQWLG------GSMDGG 114
            |.||:....:::..|....:...|.:...|:        .|::.|||. |..|      |..||.
Zfish   269 TDIFIPENGSKNNSEKIIIVLSDGKILGDPM--------TLDEVLNKT-QMKGVTRYSIGVGDGI 324

  Fly   115 TKDTDKL----LVCAPRFFVPKNKNYGQMRGICYWVRDTVADTPPLSDVRTISLIPSQAEEH-FM 174
            .|:.|.:    .:..|..:...: :||.:..|             ||.:.. .:|.::..:| |.
Zfish   325 LKNKDAIKEMTQIADPGKYYSVS-SYGALNDI-------------LSSLER-GIIGTEGTQHGFK 374

  Fly   175 LEL---GLSAHV--TDDNSGFLIGAPGVRSWKGSVLVHRGEDLAAQGSYAVKML-DSWDWVKNHF 233
            |:|   |.|:|:  .:.....|.||.|...|.|.|.:..|.        .||.| ||.:..|  |
Zfish   375 LQLAEAGFSSHLLYNEQKVEALFGAVGAYDWSGGVFLKSGN--------TVKFLNDSHNETK--F 429

  Fly   234 TYVGYALSSGYFSSNNRTSLLYVTTAPSSVLNTGKAYIFDVVGEIVRKLHVFHGEQLGEYFGYSV 298
            .|:||:::|.:..|..    ||::.||...| ||..:|||.:     :.:|.||:|:|.|||..:
Zfish   430 GYLGYSVTSAHLPSKT----LYISGAPRYNL-TGAVFIFDGL-----EKYVLHGDQVGSYFGSVL 484

  Fly   299 VAEDLNGDGLTD-VVVSAP---LNALGDSYDVGAIYVFINKGLFKFEKKIIRLPLSSG---ARFG 356
            .|.|:|.|..|| ::|.||   ||.     :.|.:.|:......:||:..:.|...:|   ||||
Zfish   485 CALDINKDEHTDHLLVGAPHFHLNG-----EEGKVLVYKLNQEDRFERAPVELRGDAGQTFARFG 544

  Fly   357 SSLSKVGDINHDGYNDLAVGAPF--AGNGAVFIFLGSEHGLRDEPSQRLDAPSREPGPYGAHM-- 417
            :::..:|||:::.:||:|||||.  ...|:|:|:.|.|.|||.  ||::     .|..:|..:  
Zfish   545 AAIGSIGDIDNNKFNDVAVGAPLETGSAGSVYIYSGFEEGLRF--SQKI-----SPSDFGMKLVY 602

  Fly   418 FGQGLSRG----SDIDGNGFNDLAIGAPGAEAVYLYRAYPVVKIHATVRSESRAIR--------P 470
            |||.:|.|    |||.     .:|:|:.|  .|.::...||:.|..|::.::..|.        .
Zfish   603 FGQSVSVGPAPASDIP-----CIAVGSLG--RVSVFETIPVLIIEPTIKIDTEVIALTHQMNKIS 660

  Fly   471 EQETITVTACYRLETTS-KARQMQQQELTFRMTID------------ELLQRVSFAPMRTNEVSF 522
            .:.::.:|.|:.::... ||.:.:.|.:.:.:.:|            :.|.:.:|......|   
Zfish   661 SELSMKITVCFNIKKGKLKAEKSETQAVDYEIDLDSGASKKRLTCGADSLIKDTFTLTPDEE--- 722

  Fly   523 QAQAGLSGSCRNFSVGVHYTG--GIFTPIDLELHYELAKKIPHSHEAFCESCAVVDPLEPKYATG 585
                     |.|..  :.|.|  ..|:||.::|.:.||.   :.:||   ...::|...|.....
Zfish   723 ---------CTNKK--LTYLGCFDCFSPIKIKLSFSLAS---NKNEA---PIRILDAFTPTEVVK 770

  Fly   586 TLSFMTGCAAHVCVSDLQLSSKDVNSSFI-FGSLEVLSFSYEITNSGEPAYVAQFNVTSSARLPF 649
            .:.|...|.|..|...:.||...::.:.| .|..:.|:.::..||:|:|:|.....:|..:.|..
Zfish   771 EIPFEKDCQAADCKPSITLSDSKISETTITMGETQNLNINFNFTNTGDPSYKTTLTLTYPSILSE 835

  Fly   650 AKVPG-----------NCRVRHEVMLCDLNGGRALARGDSESLTIIFDVTQLSGQSLTIEAAVSS 703
            .|:.|           .|.::|.|.             ...:.|.:|...||:.:|         
Zfish   836 RKIEGAACPVKNDNQIQCHLQHPVF-------------TRSAQTNLFISWQLNDKS--------- 878

  Fly   704 AGMDQNPKDNTMSTTISLREYAEIDASGGPIDGHIALKEYPYSAEVNNSYEFKSHGPSIIDE--- 765
                                               .||:    :|:..:...:::|..::|.   
Zfish   879 -----------------------------------DLKK----SEIIANLTSQNNGIQLLDSRIY 904

  Fly   766 -LTVYVDVPIAYTVTGSAGIKSIFNISSLQMQATHGSELVPIKLYDQTNTLAKEYPLEDSSRRAN 829
             ..|...:||  .:.|||      ..:.|:::.....:..|||.                     
Zfish   905 TFNVMYFLPI--LIRGSA------EPNILRIEEGGKGKTQPIKF--------------------- 940

  Fly   830 RKRRELQQDQYAIMPDVNISDILTKENLPANRTLVLDCLRGNWTICVRSQMRVQ---------LK 885
             |.:...:::|....||.|:..:.......:.|.:..      .:||....:|:         ||
Zfish   941 -KIQFQGENKYGATIDVIITIKMDTSKTDLHITKIQP------EVCVLEANKVKEASYIYKCTLK 998

  Fly   886 PEQPIDLRISFKVDLNDFVNTFDYLVIFTNVEMFKEG----DSTSIALKRNLKPNVIFNYSETPL 946
            ..|.|  .|...|.::|..:|.:.:::        ||    |.|..:.|..:|...:    |.|:
Zfish   999 ELQII--TIEANVFIHDVQDTSEKIIV--------EGQYSYDETLYSAKDTIKSFTL----EVPV 1049

  Fly   947 PIWYIILS-------LIAGHLLLGAMTYILYKLRFFKRGKK 980
            ....::.|       .|.|.|.|.....||.|..||:|..|
Zfish  1050 TKMQVMTSKGPIIGGSIGGFLFLLIFIIILIKCGFFRRRHK 1090

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItgaPS5NP_611808.2 FG-GAP 294..332 CDD:460357 14/41 (34%)
Int_alpha 351..403 CDD:214549 25/56 (45%)
Int_alpha 417..463 CDD:214549 16/51 (31%)
Integrin_alpha2 453..837 CDD:462478 70/422 (17%)
itgae.2XP_003200076.2 vWFA 180..355 CDD:469594 20/95 (21%)
Int_alpha 429..>465 CDD:214549 15/40 (38%)
Int_alpha 477..>517 CDD:214549 16/44 (36%)
Int_alpha 540..589 CDD:214549 22/50 (44%)
Integrin_alpha2 635..>850 CDD:462478 46/234 (20%)

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