DRSC/TRiP Functional Genomics Resources

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Protein Alignment ItgaPS5 and itga9

DIOPT Version :9

Sequence 1:NP_611808.2 Gene:ItgaPS5 / 37732 FlyBaseID:FBgn0034880 Length:1018 Species:Drosophila melanogaster
Sequence 2:XP_002940293.3 Gene:itga9 / 100494771 XenbaseID:XB-GENE-994231 Length:1034 Species:Xenopus tropicalis


Alignment Length:1080 Identity:273/1080 - (25%)
Similarity:450/1080 - (41%) Gaps:209/1080 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 SYFGYSLV----IRPTSIFVGAPRAQSTLESQGSINETGAVYRCPLASG---SCSHYVLND---- 98
            |:||||::    .....:.||||:|.|...|  ||...|||::|.:.|.   ||:...|..    
 Frog    45 SFFGYSVLEHYHDETRWVLVGAPKADSRYSS--SIKTPGAVFKCRVHSNPNKSCTELDLGRGNSR 107

  Fly    99 --------KLNKQFQWLGGSMDGGTKDTDKLLVCAPRFFVPKNKNYGQ----MRGICYWVRDTVA 151
                    |.:::.:|:|.::....|....:|.||.|:   ||..|..    ..|.|..:     
 Frog   108 GTRCGKTCKGDREDEWMGVTLARQPKANGSVLACAHRW---KNIYYESEDILPYGYCVII----- 164

  Fly   152 DTPPLSDVRTISLIP-------SQAEEHFMLELGLSAHVTDDNSGFLIGAPGVRSWKGSVLVHRG 209
              ||.......:|:|       ...|||...:.|::....::.  .::||||...|.|:|.|   
 Frog   165 --PPNLHANGNNLMPCYEEYKKKYGEEHGSCQAGIAGSFMEEL--VVMGAPGSYYWTGTVKV--- 222

  Fly   210 EDLAAQGSYAVKMLDSWDWVKNHFTYVGYALSSGYFSSNNRTSLLYVTTAPSSVLNTGKAYIFDV 274
              |....:...|:.|... .:..:||:|||:::|:||  ..|::..|..||.. ...||.:||..
 Frog   223 --LNLTDNKYFKLRDQVA-TEKRYTYLGYAVTAGHFS--QPTTMDVVAGAPQD-SRIGKVFIFRT 281

  Fly   275 VGEIVRKLHVFH--GEQLGEYFGYSVVAEDLNGDGLTDVVVSAPLNALGDSYDVGAIYVFINKGL 337
            ....|..:.:|.  |:::|.|||.|:.|.|||.|||:|::|.||:  ..:..|.|.:.|:||:|.
 Frog   282 DKRSVSLVKIFQASGKKVGSYFGSSLCAVDLNSDGLSDLLVGAPM--FSEVRDEGQVTVYINRGN 344

  Fly   338 FKFEKKI-IRLPLSSGARFGSSLSKVGDINHDGYNDLAVGAPFAGN--GAVFIFLGSEHGLRDEP 399
            ...::.| :....:..|.||.|::.:|||:.||:.|:|:|||...:  |||:|:.|...|:..:.
 Frog   345 GVMDEHINLNGDNAYNAHFGESMANLGDIDDDGFPDVAIGAPQEDDYAGAVYIYHGDTLGIVSKY 409

  Fly   400 SQRLDAPSREPGPYGAHMFGQGLSRGSDIDGNGFNDLAIGAPGAEAVYLYRAYPVVKIHATVRSE 464
            |.|:.  |:..|| |..||||.:|.|.|:|.||:.||.|||..::...|.|..||:.:..|:   
 Frog   410 SMRIS--SKSIGP-GLMMFGQSVSGGIDMDKNGYLDLTIGAFMSDTAVLLRTRPVITVDVTI--- 468

  Fly   465 SRAIRPEQETIT---------------VTACYRLETTSKARQMQQQELTFRMTIDELLQRVSFAP 514
               :.|....||               ||.|:|........::   ||.:.:|.|...:..|..|
 Frog   469 ---LLPTSINITAPQCHDGTQQINCVNVTVCFRFRGKHVPGEI---ELYYNLTADVAKKEKSQQP 527

  Fly   515 M--------RTNEVSFQAQ-AGLSGSCRNFSVGV-HYTGGIFTPIDLELHYELAKKIPHSHEAFC 569
            .        ...:||.:.| ..|...|..:...| .....:.:||..|..|.|.:.|.::.:...
 Frog   528 RVFLVSSGENVAQVSEKLQLTHLELKCEQYLAHVKRRVKDVISPIVFEASYSLGEHIINNQQKEL 592

  Fly   570 ESCAVV------DPLEPKYATGTLSFMTGCAAHVCVSDLQLSSKDVNSSF-------IFGSLEVL 621
            .:...:      |.|..:..|   .|...|.:..|.:||.|..|.:.|||       ..|:::.:
 Frog   593 PALKPILRWKKGDKLAQRNQT---RFERNCRSDDCAADLNLKGKLLLSSFDSKTPYLALGAVKNI 654

  Fly   622 SFSYEITNSGEPAYVAQFNVTSSARLPFAK------VPGNCRVRHEVML-CDLNGGRALARGDSE 679
            |.:..::|.|:.||........|..|.|.|      :..:|.:..:..| |.:  |....|..|:
 Frog   655 SLNISVSNYGDDAYDTNVYFNFSRELYFIKMWQEDELGISCELLEDDFLKCSV--GFPFMRSKSK 717

  Fly   680 -SLTIIFDVTQLSGQSLTIEAAVSSAG----MDQNPKDNTMSTTISLREYAEIDASGGPIDGHIA 739
             ..::|||...|||...:::..|::..    .:::..||.:...:||..  |:|.|   :.|.::
 Frog   718 YKFSVIFDTIHLSGDEESLQFLVTAQSGNIEKEESLHDNILHLAVSLMH--EVDTS---VTGVVS 777

  Fly   740 LKEYPYSAEV------------------NNSYEFKSHGPSIIDELTVYVDVPIAYTVTGSAGIKS 786
            ...:.|...|                  |.|::..:.|||.:...|:.|..|...|.||:    .
 Frog   778 PSSFVYGESVDPSNFIQLQDLECHFQPLNFSFQVYNAGPSTLPGSTINVLFPNRLTATGA----E 838

  Fly   787 IFNISSLQMQATHGSELVPIKLYDQTNTLAKEYPLEDSSRRANRKRRELQQDQYAIMPDVNISDI 851
            :|.|..:.:....|                      :.|.:.|.....:.||:..|..  .|...
 Frog   839 MFYIQDIMVSQDKG----------------------NCSFQKNPAPCVIPQDKENIFH--TIFAF 879

  Fly   852 LTKEN---LPANRT----LVLDCLRGNWTICVRSQMRVQLKPEQPIDLRISFKVDLNDFVNTFDY 909
            .||..   |...||    |||:|...:            |..|:..::.:...::..........
 Frog   880 FTKSGRKMLECERTSKSCLVLNCYISS------------LAKEETRNIDVLMLLNTEILKKDSSS 932

  Fly   910 LVIFTNVEMFKEGDSTSIALK----RNLKPNVIFNYSETPLPI-----WYIILSLIAGHLLLGAM 965
            ::.|.:..:.|. |||..|::    .:.:..|||.......|.     |.|.:||:.|.|:...:
 Frog   933 VIQFVSKAVVKV-DSTLRAIEVQQGNSNQATVIFEALHNLEPRGYVVGWIIAISLLVGILIFLLL 996

  Fly   966 TYILYKLRFFKRGKKEELKRLLEEHRSETKEPATDCEGNQ 1005
            ..:|:|:.||:|..||.::  .|::|.|.:|.....:.||
 Frog   997 AVLLWKMGFFRRRYKEIIE--AEKNRKENEESWNWVQKNQ 1034

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItgaPS5NP_611808.2 VCBS 302..375 CDD:338792 27/73 (37%)
Int_alpha 351..403 CDD:214549 21/53 (40%)
Int_alpha 417..463 CDD:214549 20/45 (44%)
Integrin_alpha2 451..836 CDD:337057 90/452 (20%)
itga9XP_002940293.3 Int_alpha 43..91 CDD:214549 18/47 (38%)
Int_alpha 243..>280 CDD:214549 15/39 (38%)
Int_alpha 300..345 CDD:214549 22/46 (48%)
Int_alpha 360..413 CDD:214549 21/52 (40%)
Int_alpha 424..>465 CDD:214549 19/40 (48%)
Integrin_alpha2 458..902 CDD:400650 102/490 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D105280at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23220
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

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