DRSC/TRiP Functional Genomics Resources

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Protein Alignment ItgaPS5 and itga11

DIOPT Version :9

Sequence 1:NP_611808.2 Gene:ItgaPS5 / 37732 FlyBaseID:FBgn0034880 Length:1018 Species:Drosophila melanogaster
Sequence 2:XP_017947982.1 Gene:itga11 / 100489152 XenbaseID:XB-GENE-483822 Length:1188 Species:Xenopus tropicalis


Alignment Length:974 Identity:246/974 - (25%)
Similarity:399/974 - (40%) Gaps:255/974 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 VADTPPLSDV------RTISLI--PSQAEEHFMLEL---GLSAHVTDDNSGFLIGAPGVRSWKGS 203
            |.|...|.|:      |..||.  .::.|..|.||:   |.|:||.:|  |.|:||.|...|.|:
 Frog   335 VTDEAALKDIVDALGERIFSLEGGTNKNETSFGLEMSQAGFSSHVVED--GILLGAVGAYDWNGA 397

  Fly   204 VL--VHRGEDLAAQGSYAVKMLDSWDWVKNHFTYVGYALSSGYFSSNNRTSLLYVTTAPSSVLNT 266
            ||  ...|:.:..:.||..:..|.   :|||..|:||.::|.......|   :||..|| ...:|
 Frog   398 VLKETSSGKVIPRRESYLKEFPDE---LKNHGAYLGYTVTSVMTWQRVR---IYVAGAP-RFNHT 455

  Fly   267 GKAYIFDVVGEIVRKLH-VFHGEQLGEYFGYSVVAEDLNGDGLTDV-VVSAPLNALGDSYDVGAI 329
            ||..:|.:.|.....:| ...|.|:|.|||..:.:.|::|||:||: :|.||:..: |.::.|.:
 Frog   456 GKVIVFTMHGAENMTIHQALQGNQIGSYFGGEMDSVDVDGDGVTDILLVGAPMYFI-DGWERGRV 519

  Fly   330 YVFINKGLFKFEKKIIR------LPLSSGARFGSSLSKVGDINHDGYNDLAVGAPFAGN--GAVF 386
            .||:.:     |::.|.      |..|..:|||||::.|.|:|.|.|||:.||||...|  ||::
 Frog   520 SVFVLR-----ERQFIHNGFLQDLNSSQNSRFGSSIAAVPDLNQDLYNDVVVGAPLEDNHKGAIY 579

  Fly   387 IFLGSEHGLRDEPSQRLDAPSREPG--PYGAHMFGQGLSRGSDIDGNGFNDLAIGAPGAEAVYLY 449
            ||.|....:..:..||:.|....||  .:|.::.|:     .|::.:|..|||:|:.| .||.|:
 Frog   580 IFHGLRKNILKKYKQRISAAELAPGLVYFGCNIHGE-----MDMNEDGLVDLAVGSMG-NAVLLW 638

  Fly   450 RAYPVVKIHATVRSESRAI--------RPEQETITVTACYRLETTSKARQMQQQE--LTFRMTID 504
             ...||||:||:..|...|        |..:|...::|........||:|.|.|.  :.:.::||
 Frog   639 -TRSVVKINATMHFEPPKINIFSKDCHRNGREATCMSAFICFSPMFKAQQFQGQNVAIKYNVSID 702

  Fly   505 E--LLQRVSFAPMRTNEVSFQAQAGLSG--SCRNFSVGVHYTGGIFTPIDLELHYELAKKIPHSH 565
            |  .:.|.....:..::...:.....||  .|:..:..|..|.....||...|.|||        
 Frog   703 ERRYIPRAIIDDIGGDKHFVKTIRATSGHNQCQQLNFHVLDTADYVKPITFSLEYEL-------- 759

  Fly   566 EAFCESCAVVDPLEPKYATGTLSFMTGC-AAHVCVSDLQLSSK-DV------------------- 609
             ||.:...|::...|.....::.|..|| ....||.||.|..| |:                   
 Frog   760 -AFSDQGPVLEEDWPTSLKVSVPFWNGCNQDERCVPDLYLDVKHDIPTALEYCQRFLYRTQSACT 823

  Fly   610 -------NSSFIFG------SLEVLSFSYEITNSGEPAYVAQFNVTSSARLPFAKV--------- 652
                   ||.||..      :|||:     :.|.||.||....|::.|..|.||.:         
 Frog   824 EFISAFDNSVFIIQRSRRRVALEVV-----LENRGENAYSTALNISHSQNLQFASLITKEDSDIK 883

  Fly   653 -----------PGNCRVRHEVMLCDLNGGRALARGDSESLTIIFDVTQLSGQSLTIEAAVSSAGM 706
                       ...|.|.:...       ||.|:   .:..:.|:.::.  |.|.......|||.
 Frog   884 IECKSDDRFPHTKTCNVSYPFF-------RAKAK---VAFRLDFEFSKY--QFLPFLQVHLSAGS 936

  Fly   707 DQNPKDNTMSTTISLREYAEIDASGGPIDGHIALKEYPYSAE------------VNNSYEFKSHG 759
            |...:::|......|.::.....|......|.:|..|..::|            .|:|::.::.|
 Frog   937 DSEEQESTRFDNEVLLDFHLKYESDLLFTRHSSLNHYEITSEGSADRYNAIGPPFNSSFKIQNLG 1001

  Fly   760 --PSIIDELTVYVDVPIAYTVTGSAGIKSIFNISSLQMQATHGSELVPIKLYDQTNTLAKEYPLE 822
              |   :|:.:.:.||:|     :.|...:..:.||              :.||.|.:...:   
 Frog  1002 FFP---EEINLKITVPVA-----TRGGNRLLFLHSL--------------ISDQENAVCNIW--- 1041

  Fly   823 DSSRRANRKRRELQQDQYAIMPDVN--ISDILTKENLPANRTLVLDC-------------LRGN- 871
               ..:...||:..::..:.:|.:|  .||:::           :||             |.|: 
 Frog  1042 ---GNSTDYRRKPTEEDLSRVPQLNHSNSDVIS-----------IDCVLILASNQEASFILHGDL 1092

  Fly   872 WTICVRSQMRVQLKPEQPIDLRISFKVDLNDFVNTFDYLVIFTNVE-------MFKEGDST---S 926
            |:...|:               ::|:     .||    :|:|..::       :|:|.:.|   :
 Frog  1093 WSRSFRA---------------MNFR-----SVN----VVVFAALQRKFQSPFIFREEEPTRQIT 1133

  Fly   927 IALKRNLKPNVIFNYSETPLPIWYIILSLIAGHLLLGAMTYILYKLRFFKRG--KKEELKRLLE 988
            .|:.:.         .|..:|||.||.|.:.|.|||..:...|:||.||||.  ::||..:.:|
 Frog  1134 FAISKQ---------EEWEVPIWVIITSTLGGLLLLALLVLALWKLGFFKRSHHEREEENKDME 1188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItgaPS5NP_611808.2 VCBS 302..375 CDD:338792 29/79 (37%)
Int_alpha 351..403 CDD:214549 23/53 (43%)
Int_alpha 417..463 CDD:214549 17/45 (38%)
Integrin_alpha2 451..836 CDD:337057 97/466 (21%)
itga11XP_017947982.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23220
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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