Sequence 1: | NP_611808.2 | Gene: | ItgaPS5 / 37732 | FlyBaseID: | FBgn0034880 | Length: | 1018 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002932062.3 | Gene: | itga4 / 100487924 | XenbaseID: | XB-GENE-960093 | Length: | 1030 | Species: | Xenopus tropicalis |
Alignment Length: | 1070 | Identity: | 269/1070 - (25%) |
---|---|---|---|
Similarity: | 446/1070 - (41%) | Gaps: | 227/1070 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 43 RSSYFGYSLVIRPTS----IFVGAPRAQSTLESQGSINETGAVYRCPL---ASGSCSHYVLND-- 98
Fly 99 --------KLNKQFQWLGGSMDGGTKDTDKLLVCAPRFFVPKN-----KNYGQMRGICYWV---- 146
Fly 147 RDTVAD--TPPLSD-VRTISLIPSQAEEHFMLELGLSAHVTDDNSGFLIGAPGVRSWKGSVLVHR 208
Fly 209 GEDLAAQGSY-----AVKMLDSWDWVKNHFTYVGYALSSGYFSSNNRTSLLYVTTAPSSVLNTGK 268
Fly 269 AYIFDVVGEIVRKLHVFHGEQLGEYFGYSVVAEDLNGDGLTDVVVSAPLNALGDSYDVGAIYVFI 333
Fly 334 NKGLFKFEKKIIRLPLSS----GARFGSSLSKVGDINHDGYNDLAVGAPFAGN--GAVFIFLGSE 392
Fly 393 HGLRDEPSQRLDAPSREPGPYGAHMFGQGLSRGSDIDGNGFNDLAIGAPGAEAVYLYRAYPVVKI 457
Fly 458 HATVRSESRAIRPEQE---------TITVTACYRLETTSKARQMQQQELTFRMTIDELLQRVSFA 513
Fly 514 PMRTNEVSFQAQAGLSGSCRNFSVGVHYTGG---------------IFTPIDLELHYELAKKIPH 563
Fly 564 SHEAFCESCAVVDPLEP---------KYATGTLSFMTGCAAHVCVSDLQLSSK-------DVNSS 612
Fly 613 FIFGSLEVLSFSYEITNSGEPAYVAQFNVTSSARLP----FAKV------PGNCRV---RHEVML 664
Fly 665 CDLNGGRALARGDS-ESLTIIFDVTQL--SGQSLTIEAAVSSAG--MDQNPKDNTMSTTISLREY 724
Fly 725 AEIDASG---------GP----IDGHIALKEYPYSAEVNNSYEFKSHGPSIIDELTVYVDVPIAY 776
Fly 777 TVTGSAGIKSIFNISSLQMQATHGSELVPIKLYDQTNTLAKEYPLEDSSRRANRKRRELQQDQYA 841
Fly 842 IMPDVNISDILTKENLPANRTLVLDCLRGN----WTICVRSQMRVQLKPEQPIDLRISFKVDLND 902
Fly 903 FVNTFDYLVI--FTNVEMFKEGDSTSIALKRNLKPNVIF----NYSETPLPIWYII-LSLIAGHL 960
Fly 961 LLGAMTYILYKLRFFKR-----GKKEELKR 985 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ItgaPS5 | NP_611808.2 | VCBS | 302..375 | CDD:338792 | 28/76 (37%) |
Int_alpha | 351..403 | CDD:214549 | 23/57 (40%) | ||
Int_alpha | 417..463 | CDD:214549 | 23/45 (51%) | ||
Integrin_alpha2 | 451..836 | CDD:337057 | 88/455 (19%) | ||
itga4 | XP_002932062.3 | Int_alpha | 47..98 | CDD:214549 | 14/53 (26%) |
Int_alpha | 301..347 | CDD:214549 | 21/47 (45%) | ||
Int_alpha | 363..415 | CDD:214549 | 23/51 (45%) | ||
Int_alpha | 426..>464 | CDD:214549 | 20/37 (54%) | ||
Integrin_alpha2 | 460..899 | CDD:400650 | 93/498 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D105280at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR23220 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.020 |