Protein Alignment Rrp4 and RRP4

DIOPT Version :9

• Sequence 1: NP_001286771.1
• Gene: Rrp4 / 37731
• FlyBaseID: FBgn0034879
• Length: 298
• Species: Drosophila melanogaster
• Sequence 2: NP_011936.1
• Gene: RRP4 / 856466
• SGDID: S000001111
• Length: 359
• Species: Saccharomyces cerevisiae
• Alignment Length: 327
• Identity: 132/327 - (40%)
• Similarity: 185/327 - (56%)
• Gaps: 45/327 - (13%)

  Fly    12 DRVDWRDL-------AAQTEEQPRVYTPGEVLMPEAGFMRGHGTFVEDENIKSSVAGVIQKVNKL 69
            |..|..|:       |:::|...::.||||::..:..:||||||:..|....|||||.:.:||:|
Yeast    30 DENDEEDIYMHDVNSASKSESDSQIVTPGELVTDDPIWMRGHGTYFLDNMTYSSVAGTVSRVNRL 94

  Fly    70 ISVRPLKSRYVGEIGDVVVARVSEVQQKRWRVDTNSRLDSILLLSSVNLPGGELRRRSAEDEQMM 134
            :||.|||.||..|.||.||.|::||..|||:||...:..::|:|.|||||||.|||:|..||..|
Yeast    95 LSVIPLKGRYAPETGDHVVGRIAEVGNKRWKVDIGGKQHAVLMLGSVNLPGGILRRKSESDELQM 159

  Fly   135 RRYLDEGDLISAEVQNIFEEGSLSLYTRSLKYGKLSQGILVKVFPALVKRRKMHFHNLPCGASVI 199
            |.:|.||||::||||::|::||.||:|||||||||..|:..:|..:|:.|.|.|.||||...:|:
Yeast   160 RSFLKEGDLLNAEVQSLFQDGSASLHTRSLKYGKLRNGMFCQVPSSLIVRAKNHTHNLPGNITVV 224

  Fly   200 LGNNGYIWISPTKGQE--------------EEGGEGGFAQNLNEHVPRAD--------------- 235
            ||.|||||:..|...:              :..|..| |.:||..:.|.:
Yeast   225 LGVNGYIWLRKTSQMDLARDTPSANNSSSIKSTGPTG-AVSLNPSITRLEEESSWQIYSDENDPS 288

  Fly   236 -----REVIARLRNSILALAKCKLMIYDTSIQYAYEESLRY-EAHELLQQNAIYDIGQQ--TQAR 292
                 |:.|.|..|.|.|||.|::.|....|..|||.|:.| ...||:::|.:..||..  |..:
Yeast   289 ISNNIRQAICRYANVIKALAFCEIGITQQRIVSAYEASMVYSNVGELIEKNVMESIGSDILTAEK 353

  Fly   293 LR 294
            :|
Yeast   354 MR 355

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rrp4	NP_001286771.1	Rrp4	27..>209	CDD:224022	97/181 (54%)
		KH-I	172..290	CDD:412160	46/154 (30%)
RRP4	NP_011936.1	Rrp4	45..316	CDD:224022	116/271 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C157344718
Domainoid	1	1.000	129	1.000	Domainoid score	I1150
eggNOG	1	0.900	-	-		E1_COG1097
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H6095
Inparanoid	1	1.050	220	1.000	Inparanoid score	I772
Isobase	1	0.950	-	0	Normalized mean entropy	S934
OMA	1	1.010	-	-		QHG54120
OrthoFinder	1	1.000	-	-		FOG0004841
OrthoInspector	1	1.000	-	-		oto99113
orthoMCL	1	0.900	-	-		OOG6_101400
Panther	1	1.100	-	-	LDO	PTHR21321
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1222
SonicParanoid	1	1.000	-	-		X3419
TreeFam	1	0.960	-	-
	16	15.740