Protein Alignment Rrp4 and RRP40

DIOPT Version :9

• Sequence 1: NP_001286771.1
• Gene: Rrp4 / 37731
• FlyBaseID: FBgn0034879
• Length: 298
• Species: Drosophila melanogaster
• Sequence 2: NP_014499.2
• Gene: RRP40 / 854023
• SGDID: S000005502
• Length: 240
• Species: Saccharomyces cerevisiae
• Alignment Length: 146
• Identity: 35/146 - (23%)
• Similarity: 57/146 - (39%)
• Gaps: 27/146 - (18%)

  Fly    78 RYVGEIGDVVVARVSEVQQKRWRVDTNSRLDSILLLSSVNLPGGELRRRSAEDEQMMRRYLDEGD 142
            ||:..:.|.|:..:.......::|...: ..|.:.||.:..|....:.|..         |..||
Yeast    63 RYIPSVNDFVIGVIIGTFSDSYKVSLQN-FSSSVSLSYMAFPNASKKNRPT---------LQVGD 117

  Fly   143 LISAEVQNIFEEGSL------SLYTRSLKYGKLSQGILVKVFPALVKRRKMHFHN----LPCGAS 197
            |:.|.|....:|...      |...|...:|.|..|:::.|  .|...|::.|:|    |...|:
Yeast   118 LVYARVCTAEKELEAEIECFDSTTGRDAGFGILEDGMIIDV--NLNFARQLLFNNDFPLLKVLAA 180

  Fly   198 -----VILGNNGYIWI 208
                 |.:|.||.||:
Yeast   181 HTKFEVAIGLNGKIWV 196

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rrp4	NP_001286771.1	Rrp4	27..>209	CDD:224022	35/146 (24%)
		KH-I	172..290	CDD:412160	14/46 (30%)
RRP40	NP_014499.2	Rrp4	1..240	CDD:224022	35/146 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1097
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810