Protein Alignment Rrp4 and Exosc3

DIOPT Version :9

• Sequence 1: NP_001286771.1
• Gene: Rrp4 / 37731
• FlyBaseID: FBgn0034879
• Length: 298
• Species: Drosophila melanogaster
• Sequence 2: NP_079789.1
• Gene: Exosc3 / 66362
• MGIID: 1913612
• Length: 274
• Species: Mus musculus
• Alignment Length: 263
• Identity: 58/263 - (22%)
• Similarity: 91/263 - (34%)
• Gaps: 91/263 - (34%)

  Fly    26 QPR---VYTPG------EVLMPEAGFMR-------GHGTFVEDENIKSSVAGVIQKVNKLISVRP 74
            :||   |..||      .:|:.:.|.:|       |.|.:..|...|..|              |
Mouse    60 RPRLRVVCGPGLRRCGDRLLVTKCGRLRHKEPSGGGGGVYWVDSQQKRYV--------------P 110

  Fly    75 LKSRYVGEIGDVVVARVSEVQQKRWRVDTNSRLDSILLLSSVNLPGGELRRRSAEDEQMMRRYLD 139
            :|..:|  || :|:|:..::    ::||...  .....||.:...|...|.|.         .:.
Mouse   111 VKGDHV--IG-IVIAKSGDI----FKVDVGG--SEPASLSYLAFEGATKRNRP---------NVQ 157

  Fly   140 EGDLISAE--VQNIFEEGSLSLYT---RSLKYGKLSQ-GILVKVFPALVKR------------RK 186
            .||||..:  |.|...|..:....   |:...|.:.| |:|.||...|:::            .|
Mouse   158 VGDLIYGQCVVANKDMEPEMVCIDSCGRANGMGVIGQDGLLFKVTLGLIRKLLAPDCEIVQELGK 222

  Fly   187 MHFHNLPCGASVILGNNGYIWISPTKGQEEEGGEGGFAQNL--------NEHVPRADR-EVIARL 242
            ::      ...::.|.||.||:.....|          |.|        .||:....| ::.|||
Mouse   223 LY------PLEIVFGMNGRIWVKAKTIQ----------QTLILANVLEACEHMTTEQRKQIFARL 271

  Fly   243 RNS 245
            ..|
Mouse   272 AES 274

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rrp4	NP_001286771.1	Rrp4	27..>209	CDD:224022	48/215 (22%)
		KH-I	172..290	CDD:412160	21/95 (22%)
Exosc3	NP_079789.1	S1_Rrp40	107..192	CDD:240216	24/116 (21%)
		KH_6	196..242	CDD:292607	11/51 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1097
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900