Protein Alignment Rrp4 and exosc2

DIOPT Version :10

• Sequence 1: NP_611807.1
• Gene: Rrp4 / 37731
• FlyBaseID: FBgn0034879
• Length: 298
• Species: Drosophila melanogaster
• Sequence 2: NP_001025658.1
• Gene: exosc2 / 595050
• XenbaseID: XB-GENE-977773
• Length: 293
• Species: Xenopus tropicalis
• Alignment Length: 268
• Identity: 170/268 - (63%)
• Similarity: 215/268 - (80%)
• Gaps: 4/268 - (1%)

  Fly    31 TPGEVLMPEAGFMRGHGTFVEDENIKSSVAGVIQKVNKLISVRPLKSRYVGEIGDVVVARVSEVQ 95
            |||:.:..:.||||||||:.||:.:.:|||||:::|||||.||.||:||.||:||:||.|::|||
 Frog    28 TPGDTITTDTGFMRGHGTYTEDDKLVASVAGVVERVNKLICVRALKARYNGEVGDIVVGRITEVQ 92

  Fly    96 QKRWRVDTNSRLDSILLLSSVNLPGGELRRRSAEDEQMMRRYLDEGDLISAEVQNIFEEGSLSLY 160
            ||||:|||||||||:|:||:|||||||||||||:||..||.||.||||||||||.::.:|:|||:
 Frog    93 QKRWKVDTNSRLDSVLILSAVNLPGGELRRRSAKDELAMRDYLQEGDLISAEVQAVYSDGALSLH 157

  Fly   161 TRSLKYGKLSQGILVKVFPALVKRRKMHFHNLPCGASVILGNNGYIWISPT-KGQEEEGGEGGFA 224
            |||||||||.||:||:|.|:|:||||.||||||||||:||.|||:||:..| |..|||.  |||.
 Frog   158 TRSLKYGKLGQGVLVRVSPSLIKRRKTHFHNLPCGASIILANNGFIWLCATPKEMEEEA--GGFI 220

  Fly   225 QNLNEHVPRADREVIARLRNSILALAKCKLMIYDTSIQYAYEESLRYEAHELLQQNAIYDIGQQT 289
            .|| |.|..:|||||:||||.|||||..|:::||||:.|.||.||.::..|||:...|.||..:|
 Frog   221 TNL-EPVALSDREVISRLRNCILALASQKMLLYDTSVLYCYEASLAHQIKELLKVEVIEDIVMET 284

  Fly   290 QARLRDAD 297
            :.||.:.:
 Frog   285 RQRLLEQE 292

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rrp4	NP_611807.1	ECR1_N	29..66	CDD:464162	18/34 (53%)
		S1_Rrp4	78..169	CDD:240215	68/90 (76%)
		KH-I_Rrp4_eukar	172..290	CDD:411953	69/118 (58%)
exosc2	NP_001025658.1	ECR1_N	26..63	CDD:464162	18/34 (53%)
		S1_Rrp4	75..166	CDD:240215	68/90 (76%)
		KH-I_Rrp4_eukar	169..285	CDD:411953	69/118 (58%)