Protein Alignment Rrp4 and Rrp40

DIOPT Version :10

• Sequence 1: NP_611807.1
• Gene: Rrp4 / 37731
• FlyBaseID: FBgn0034879
• Length: 298
• Species: Drosophila melanogaster
• Sequence 2: NP_722725.1
• Gene: Rrp40 / 319033
• FlyBaseID: FBgn0260648
• Length: 232
• Species: Drosophila melanogaster
• Alignment Length: 244
• Identity: 58/244 - (23%)
• Similarity: 89/244 - (36%)
• Gaps: 62/244 - (25%)

  Fly    29 VYTPG------EVLMPEAGFMRGHGTFVEDENIKSSVAGVIQ-KVNKLISVRPLKSRYVGEIGDV 86
            :..||      |.|......:.|.|....|:.:.:|.||.:: |......|...:.||:...||:
  Fly     7 IVMPGERIAAIEELAKSKRVILGPGLRRLDDTVVASKAGPLRHKEPGTFWVDNYQRRYIPARGDL 71

  Fly    87 VVARVSEVQQKRWRVD---TNSRLDSILLLSSVNLPGGELRRRSAEDEQMMRRYLDEGDLISAEV 148
            ::..|.......:|||   |::...|.|...:.:       :::..|       |..||||.|.|
  Fly    72 ILGIVRAKAGDLYRVDIGATDTASISYLAFEAAS-------KKNRPD-------LIPGDLIYARV 122

  Fly   149 QNIFEEGSLSLYT-----RSLKYGKLSQGILVKVFPALVKRRKMHFHNLPCGAS--------VIL 200
            .|...:....|..     :|.|.|.|:.|...|.  :|...|.:...|.|..|:        :.:
  Fly   123 LNASADIEPELVCVNSVGKSGKLGVLTDGFFFKC--SLNLGRMLLRENCPVLAALTRELPYEIAV 185

  Fly   201 GNNGYIWISPTKGQEEEGGEGGFAQNLNEHVPRADREVIARLRNSILAL 249
            |.||.||:.              |.:|.|.|         .|.|:|.||
  Fly   186 GVNGRIWLK--------------AHSLKETV---------ALANAISAL 211

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rrp4	NP_611807.1	ECR1_N	29..66	CDD:464162	10/43 (23%)
		S1_Rrp4	78..169	CDD:240215	24/98 (24%)
		KH-I_Rrp4_eukar	172..290	CDD:411953	21/86 (24%)
Rrp40	NP_722725.1	Rrp40_N	23..63	CDD:436400	8/39 (21%)
		S1_Rrp40	63..148	CDD:240216	24/98 (24%)
		KH-I_Rrp40	150..226	CDD:411954	21/87 (24%)