Protein Alignment Rrp4 and Rrp40

DIOPT Version :9

• Sequence 1: NP_001286771.1
• Gene: Rrp4 / 37731
• FlyBaseID: FBgn0034879
• Length: 298
• Species: Drosophila melanogaster
• Sequence 2: NP_001285565.1
• Gene: Rrp40 / 319033
• FlyBaseID: FBgn0260648
• Length: 232
• Species: Drosophila melanogaster
• Alignment Length: 244
• Identity: 58/244 - (23%)
• Similarity: 89/244 - (36%)
• Gaps: 62/244 - (25%)

  Fly    29 VYTPG------EVLMPEAGFMRGHGTFVEDENIKSSVAGVIQ-KVNKLISVRPLKSRYVGEIGDV 86
            :..||      |.|......:.|.|....|:.:.:|.||.:: |......|...:.||:...||:
  Fly     7 IVMPGERIAAIEELAKSKRVILGPGLRRLDDTVVASKAGPLRHKEPGTFWVDNYQRRYIPARGDL 71

  Fly    87 VVARVSEVQQKRWRVD---TNSRLDSILLLSSVNLPGGELRRRSAEDEQMMRRYLDEGDLISAEV 148
            ::..|.......:|||   |::...|.|...:.:       :::..|       |..||||.|.|
  Fly    72 ILGIVRAKAGDLYRVDIGATDTASISYLAFEAAS-------KKNRPD-------LIPGDLIYARV 122

  Fly   149 QNIFEEGSLSLYT-----RSLKYGKLSQGILVKVFPALVKRRKMHFHNLPCGAS--------VIL 200
            .|...:....|..     :|.|.|.|:.|...|.  :|...|.:...|.|..|:        :.:
  Fly   123 LNASADIEPELVCVNSVGKSGKLGVLTDGFFFKC--SLNLGRMLLRENCPVLAALTRELPYEIAV 185

  Fly   201 GNNGYIWISPTKGQEEEGGEGGFAQNLNEHVPRADREVIARLRNSILAL 249
            |.||.||:.              |.:|.|.|         .|.|:|.||
  Fly   186 GVNGRIWLK--------------AHSLKETV---------ALANAISAL 211

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rrp4	NP_001286771.1	Rrp4	27..>209	CDD:224022	49/202 (24%)
		KH-I	172..290	CDD:412160	21/86 (24%)
Rrp40	NP_001285565.1	Rrp4	5..213	CDD:224022	58/244 (24%)
		S1_Rrp40	63..148	CDD:240216	24/98 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45456495
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1097
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR21321
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	4	3.840