Protein Alignment Rrp4 and exos-3

DIOPT Version :9

• Sequence 1: NP_001286771.1
• Gene: Rrp4 / 37731
• FlyBaseID: FBgn0034879
• Length: 298
• Species: Drosophila melanogaster
• Sequence 2: NP_492751.1
• Gene: exos-3 / 186604
• WormBaseID: WBGene00010325
• Length: 226
• Species: Caenorhabditis elegans
• Alignment Length: 208
• Identity: 47/208 - (22%)
• Similarity: 83/208 - (39%)
• Gaps: 39/208 - (18%)

  Fly    29 VYTPGEVLMPEA---GFMRGHGTFVEDENIKSSVAGVIQKVNKLISVRPLKSRYVGEIGDVVVAR 90
            ||.||:|:...:   ..:.|:|..|..:...::..|.....:..:.:.....||:.:.||.|:|.
 Worm     3 VYLPGDVINEPSSSDSSIIGYGISVRGQTRIATQPGAFHNDDGKVWLNVHSKRYIPQEGDRVIAI 67

  Fly    91 VSEVQQKRWRVDTNSRLDSILLLSSVNLPGGELRRRSAEDEQMMRRYLDEGDLISAEVQNIFE-- 153
            |:......:|:|..:.  ...:::..|..|...|.|.         .|..||:|.|   .:|:
 Worm    68 VTSKTGDFFRLDIGTA--EYAMINFTNFEGATKRNRP---------NLKTGDIIYA---TVFDTT 118

  Fly   154 ---EGSLSLY---TRSLKYGKLSQGILVKVFPALVKRRKMHFHNLPCGA----------SVILGN 202
               |..|:..   .|:...|:|:.|.:.||  :|...|::  .|..|..          .:.:|.
 Worm   119 PRTEAELTCVDDEKRARGMGQLNGGFMFKV--SLNHCRRL--INPSCKILQTVGKFFKFEITVGM 179

  Fly   203 NGYIWISPTKGQE 215
            ||.||||.:...:
 Worm   180 NGRIWISASTSDD 192

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rrp4	NP_001286771.1	Rrp4	27..>209	CDD:224022	45/200 (23%)
		KH-I	172..290	CDD:412160	14/54 (26%)
exos-3	NP_492751.1	Rrp4	5..>187	CDD:224022	44/199 (22%)
		S1_Rrp40	55..140	CDD:240216	23/98 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1097
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900