Protein Alignment Rrp4 and exos-2

DIOPT Version :9

• Sequence 1: NP_001286771.1
• Gene: Rrp4 / 37731
• FlyBaseID: FBgn0034879
• Length: 298
• Species: Drosophila melanogaster
• Sequence 2: NP_500978.1
• Gene: exos-2 / 177403
• WormBaseID: WBGene00022232
• Length: 303
• Species: Caenorhabditis elegans
• Alignment Length: 276
• Identity: 122/276 - (44%)
• Similarity: 173/276 - (62%)
• Gaps: 14/276 - (5%)

  Fly    25 EQPRVYTPGEVL--MPEAGFMRGHGTFVEDENIKSSVAGVIQKVNKLISVRPLKSRYVGEIGDVV 87
            ::.::..||..:  .|:. |||||||:|.|..|.||::||:|::|:|:.|:.:|.||.||:||||
 Worm    27 DETKIVIPGHSVCDAPQQ-FMRGHGTYVRDGEIVSSLSGVVQQLNRLLMVKTIKQRYAGEVGDVV 90

  Fly    88 VARVSEVQQKRWRVDTNSRLDSILLLSSVNLPGGELRRRSAEDEQMMRRYLDEGDLISAEVQNIF 152
            ||||.|||.|||:.|..|||.:.|.|.||.||||:.||:..|||:.|..:|..|:||.||||.:.
 Worm    91 VARVVEVQAKRWKCDVASRLHANLPLGSVLLPGGDFRRKDVEDEEKMSEFLKNGELICAEVQQVQ 155

  Fly   153 EEGSLSLYTRSLKYGKLSQGILVKVFPALVKRRKMHFHNLPCGASVILGNNGYIWISPTKGQ--- 214
            .:|:|.|:||:.|||||.||||:||.|.|:|:.|.|||.||.|.:||:|.||.:|::|:..:
 Worm   156 HDGTLMLHTRNNKYGKLQQGILIKVPPHLIKKSKKHFHTLPYGMAVIIGCNGSVWVTPSLPETTL 220

  Fly   215 EEEGGEGGFAQNLNEH--VPRADREVIARLRNSILALAKCKLMIYDTSIQYAYEESLRYEAHELL 277
            ||:|      .:::|.  ||...|..:.|:...:..|....:.||..|:...||.|..||..||.
 Worm   221 EEDG------SHVHEFQIVPPDVRVTMVRIAACVRLLRDYSISIYLNSLTTCYEMSQPYEIKELA 279

  Fly   278 QQNAIYDIGQQTQARL 293
            :|:....:.....|||
 Worm   280 EQDTSSRLAYLIAARL 295

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rrp4	NP_001286771.1	Rrp4	27..>209	CDD:224022	98/183 (54%)
		KH-I	172..290	CDD:412160	42/122 (34%)
exos-2	NP_500978.1	ECR1_N	31..68	CDD:291080	17/37 (46%)
		S1_Rrp4	81..172	CDD:240215	52/90 (58%)
		KH_6	175..214	CDD:292607	21/38 (55%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160162240
Domainoid	1	1.000	121	1.000	Domainoid score	I3552
eggNOG	1	0.900	-	-		E1_COG1097
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H6095
Inparanoid	1	1.050	221	1.000	Inparanoid score	I2285
Isobase	1	0.950	-	0	Normalized mean entropy	S934
OMA	1	1.010	-	-		QHG54120
OrthoDB	1	1.010	-	-		D1121868at2759
OrthoFinder	1	1.000	-	-		FOG0004841
OrthoInspector	1	1.000	-	-		oto19532
orthoMCL	1	0.900	-	-		OOG6_101400
Panther	1	1.100	-	-	LDO	PTHR21321
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1222
SonicParanoid	1	1.000	-	-		X3419
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	17	16.750