DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pita and AZF1

DIOPT Version :9

Sequence 1:NP_611806.3 Gene:pita / 37730 FlyBaseID:FBgn0034878 Length:683 Species:Drosophila melanogaster
Sequence 2:NP_014756.3 Gene:AZF1 / 854280 SGDID:S000005639 Length:914 Species:Saccharomyces cerevisiae


Alignment Length:495 Identity:111/495 - (22%)
Similarity:189/495 - (38%) Gaps:102/495 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   184 NQE---LSMDDVQSM----LEDMASELEKEFPDIPQKASPVKPKVLNKSSI----RILNKG-PAA 236
            |||   |:..|..|.    |:::...|.|...|....:|.:. :.|:|:.:    ..|||. ..:
Yeast   398 NQEDHSLASTDTTSNSRKDLKEIEQRLRKHLNDEDNYSSAIS-RPLDKNDVIEGSEGLNKHIDES 461

  Fly   237 PVEPRLATPKVKRDDSGNVAIVTEVLDSDLPLDDQDDPTKNAEKVATDVF-----PCPDCER--- 293
            .::|.: ..|.|:||| .|.:..|:..:|.|:  ..|.:.:||..|...|     |.||...   
Yeast   462 GMQPNI-IKKRKKDDS-TVYVKNEMPRTDPPM--SKDNSTSAEGAAMANFSGKEPPIPDISSVSD 522

  Fly   294 -------SFPLQQLLEI---------HRLNHTRSRSFQCLLCEKSFFSKYDL--AKHNFVHTGER 340
                   :..:.||:.|         .::|.|:...   ||    |....|:  .|...|...|:
Yeast   523 DATNLIGATKVDQLMLIIQARKKGFTEKVNTTQDGD---LL----FNQTMDILPPKSELVGGVEK 580

  Fly   341 PFKCAICSKAFTRKALLHRHERTHTDVPKFICVYCEKPFLSRQEMEKHAERHQKKRPFQCGVCTK 405
            |       |.......:.:||          |.||.:.|.....:|.|...|...:||.|..|.|
Yeast   581 P-------KGTQNTRAVKKHE----------CPYCHRLFSQATHLEVHVRSHIGYKPFVCDYCGK 628

  Fly   406 SFAFKQGLERHETVHSTNLPFPCQHCERSFSTASKLARHLVAHAGKRAYPCKY--CHKSYMLSHH 468
            .|.....|..||.:|:...|:.|..|::.||....||.|||.|...:.:.||.  |:|::....:
Yeast   629 RFTQGGNLRTHERLHTGEKPYSCDICDKKFSRKGNLAAHLVTHQKLKPFVCKLENCNKTFTQLGN 693

  Fly   469 LSRHL-RTHTQTSDASFVCSECKVSYSNYNDLLDHALIHATASLKCPMCR------KQIEDIDSV 526
            :..|. |.|.:|.:| ......:::.|....|.:..|:...||:.....|      |.:....|.
Yeast   694 MKAHQNRFHKETLNA-LTAKLAEMNPSENIPLEERQLLEYFASIYKNSNRGIKGRGKGVGTKKST 757

  Fly   527 ESHMDQHKQSERHACEFCDHIFLTQKCLQRHIEDDHVVEMEPYQNEFEDDGEGEGGVDEKEEHLD 591
            .|..:.|..|               ..|..:...::.:     .|:.|::|..||.:|.......
Yeast   758 ISSPENHPAS---------------TILNPNTNANNAI-----ANDSENNGNPEGNIDSSSNSNP 802

  Fly   592 DFEDMDNVKQEEFVT---EYLEDDALYEDHLDDSDESFTP 628
            ....|.:..|::..|   ::::::  :.:.::.|:.|..|
Yeast   803 GSHSMISPTQKDMGTLQSQFIQNN--FNNSVNSSNPSNQP 840

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pitaNP_611806.3 zf-AD 17..92 CDD:214871
COG5048 <281..506 CDD:227381 61/253 (24%)
C2H2 Zn finger 288..308 CDD:275368 5/38 (13%)
C2H2 Zn finger 316..336 CDD:275368 5/21 (24%)
zf-H2C2_2 328..353 CDD:290200 6/26 (23%)
C2H2 Zn finger 344..364 CDD:275368 3/19 (16%)
C2H2 Zn finger 372..388 CDD:275370 5/15 (33%)
C2H2 Zn finger 400..420 CDD:275368 7/19 (37%)
C2H2 Zn finger 428..448 CDD:275368 9/19 (47%)
C2H2 Zn finger 456..476 CDD:275368 6/22 (27%)
C2H2 Zn finger 486..506 CDD:275368 3/19 (16%)
HARE-HTH <566..625 CDD:294801 10/61 (16%)
AZF1NP_014756.3 COG5048 342..768 CDD:227381 98/414 (24%)
C2H2 Zn finger 595..615 CDD:275368 6/19 (32%)
C2H2 Zn finger 623..643 CDD:275368 7/19 (37%)
C2H2 Zn finger 651..671 CDD:275368 9/19 (47%)
C2H2 Zn finger 679..702 CDD:275368 6/22 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.