DRSC/TRiP Functional Genomics Resources

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Protein Alignment pita and ZNF668

DIOPT Version :9

Sequence 1:NP_611806.3 Gene:pita / 37730 FlyBaseID:FBgn0034878 Length:683 Species:Drosophila melanogaster
Sequence 2:NP_001166140.1 Gene:ZNF668 / 79759 HGNCID:25821 Length:642 Species:Homo sapiens


Alignment Length:407 Identity:112/407 - (27%)
Similarity:157/407 - (38%) Gaps:79/407 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 KEFPDIPQKASPVKPKVLNKSSIRILNKGPA------APVEPRLATPKVKRDDSGNVAIVTEVLD 263
            |.||:.|:.|.            .....|||      |.|:|:..|.....:.||.     :|..
Human    52 KTFPNAPRAAR------------HAATHGPADCSEEVAEVKPKPETEAKAEEASGE-----KVSG 99

  Fly   264 S-------DLPLDDQDDPTKNAEKVATDV------------FPCPDCERSFPLQQLLEIHRLNHT 309
            |       ..||      ...|.|.|.::            ||||:|.|.|.....|.:|..:|.
Human   100 SAAKPRPYACPL------CPKAYKTAPELRSHGRSHTGEKPFPCPECGRRFMQPVCLRVHLASHA 158

  Fly   310 RSRSFQCLLCEKSFFSKYDLAKHNFVHTGERPFKCAICSKAFTRKALLHRHERTHTDVPKFICVY 374
            ....|:|..|.|::.:...|..|...||||||:.||.|.|:|...::..:|.|||..:..:.|..
Human   159 GELPFRCAHCPKAYGALSKLKIHQRGHTGERPYACADCGKSFADPSVFRKHRRTHAGLRPYSCER 223

  Fly   375 CEKPFLSRQEMEKHAERHQKKRPFQCGVCTKSFAFKQGL-------------------------- 413
            |.|.:...:::..|...|..:|||.|..|.|||:....|                          
Human   224 CGKAYAELKDLRNHERSHTGERPFLCSECGKSFSRSSSLTCHQRIHAAQKPYRCPACGKGFTQLS 288

  Fly   414 --ERHETVHSTNLPFPCQHCERSFSTASKLARHLVAHAGKRAYPCKYCHKSYMLSHHLSRHLRTH 476
              :.||..||...||.|..|.|.||..|...||..||.|.:.|.|:.|.|.:.....|:.|.|.|
Human   289 SYQSHERTHSGEKPFLCPRCGRMFSDPSSFRRHQRAHEGVKPYHCEKCGKDFRQPADLAMHRRVH 353

  Fly   477 TQTSDASFVCSECKVSYSNYNDLLDHALIHA-TASLKCPMCRKQIEDIDSVESHMDQHKQSERHA 540
              |.|..|.|.:|..::....||..|||:|: ....:|..|.:...:..|:..|...|.......
Human   354 --TGDRPFKCLQCDKTFVASWDLKRHALVHSGQRPFRCEECGRAFAERASLTKHSRVHSGERPFH 416

  Fly   541 CEFCDHIFLTQKCLQRH 557
            |..|...|:....|::|
Human   417 CNACGKSFVVSSSLRKH 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pitaNP_611806.3 zf-AD 17..92 CDD:214871
COG5048 <281..506 CDD:227381 81/264 (31%)
C2H2 Zn finger 288..308 CDD:275368 7/19 (37%)
C2H2 Zn finger 316..336 CDD:275368 5/19 (26%)
zf-H2C2_2 328..353 CDD:290200 13/24 (54%)
C2H2 Zn finger 344..364 CDD:275368 7/19 (37%)
C2H2 Zn finger 372..388 CDD:275370 3/15 (20%)
C2H2 Zn finger 400..420 CDD:275368 8/47 (17%)
C2H2 Zn finger 428..448 CDD:275368 8/19 (42%)
C2H2 Zn finger 456..476 CDD:275368 6/19 (32%)
C2H2 Zn finger 486..506 CDD:275368 7/19 (37%)
HARE-HTH <566..625 CDD:294801
ZNF668NP_001166140.1 COG5048 103..437 CDD:227381 96/339 (28%)
C2H2 Zn finger 109..129 CDD:275370 5/25 (20%)
zf-H2C2_2 121..144 CDD:290200 6/22 (27%)
C2H2 Zn finger 137..157 CDD:275368 7/19 (37%)
C2H2 Zn finger 165..185 CDD:275368 5/19 (26%)
zf-H2C2_2 178..201 CDD:290200 12/22 (55%)
C2H2 Zn finger 193..213 CDD:275368 7/19 (37%)
C2H2 Zn finger 221..241 CDD:275368 4/19 (21%)
zf-H2C2_2 233..258 CDD:290200 10/24 (42%)
C2H2 Zn finger 249..269 CDD:275368 6/19 (32%)
COG5048 271..618 CDD:227381 46/165 (28%)
C2H2 Zn finger 277..297 CDD:275368 2/19 (11%)
zf-H2C2_2 289..313 CDD:290200 9/23 (39%)
C2H2 Zn finger 305..325 CDD:275368 8/19 (42%)
zf-H2C2_2 317..342 CDD:290200 9/24 (38%)
C2H2 Zn finger 333..353 CDD:275368 6/19 (32%)
zf-H2C2_2 345..369 CDD:290200 9/25 (36%)
C2H2 Zn finger 361..381 CDD:275368 7/19 (37%)
zf-H2C2_2 373..397 CDD:290200 8/23 (35%)
C2H2 Zn finger 389..409 CDD:275368 4/19 (21%)
zf-H2C2_2 401..425 CDD:290200 5/23 (22%)
C2H2 Zn finger 417..437 CDD:275368 5/17 (29%)
C2H2 Zn finger 541..561 CDD:275368
zf-H2C2_2 554..577 CDD:290200
C2H2 Zn finger 569..589 CDD:275368
zf-H2C2_2 582..606 CDD:290200
C2H2 Zn finger 597..617 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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