DRSC/TRiP Functional Genomics Resources

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Protein Alignment pita and znf470

DIOPT Version :10

Sequence 1:NP_611806.3 Gene:pita / 37730 FlyBaseID:FBgn0034878 Length:683 Species:Drosophila melanogaster
Sequence 2:NP_001107698.2 Gene:znf470 / 779587 XenbaseID:XB-GENE-5883472 Length:401 Species:Xenopus tropicalis


Alignment Length:273 Identity:93/273 - (34%)
Similarity:131/273 - (47%) Gaps:3/273 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   286 FPCPDCERSFPLQQLLEIHRLNHTRSRSFQCLLCEKSFFSKYDLAKHNFVHTGERPFKCAICSKA 350
            |.|.:|.:.|..:..|.||:..||..:.|.|..|.|.|..|.....|..|||||:.|.|..|.|.
 Frog   101 FMCTECGKRFAEKNYLIIHQTVHTGEKPFTCTECGKGFSEKRKFVIHQRVHTGEKSFTCTECGKC 165

  Fly   351 FTRKALLHRHERTHTDVPKFICVYCEKPFLSRQEMEKHAERHQKKRPFQCGVCTKSFAFKQGLER 415
            |:.|:.|..|:|.||....|.|:.|.:.|..:..:::|..:|..::||.|..|.||.:.:..||.
 Frog   166 FSVKSGLKSHQRIHTGEKPFTCIECGESFRHKASLKEHKIKHTGEKPFTCPECGKSCSRQTDLEI 230

  Fly   416 HETVHSTNLPFPCQHCERSFSTASKLARHLVAHAGKRAYPCKYCHKSYMLSHHLSRHLRTHTQTS 480
            |:.:|:...|:||..|.:||:..|.|.||...|.|.:.:.|..||||:...|.||.|.|.|  |.
 Frog   231 HQRIHTGEKPYPCTECGKSFTINSNLVRHQRIHTGIKPFACTECHKSFSAHHKLSLHKRVH--TG 293

  Fly   481 DASFVCSECKVSYSNYNDLLDHALIH-ATASLKCPMCRKQIEDIDSVESHMDQHKQSERHACEFC 544
            :..|.|:||..|:|..:.|..|...| ......|..|.|......|::.|...|...:..||..|
 Frog   294 EKPFTCTECGKSFSRKDSLQYHYTTHTGEKPFTCTECGKCFSKKSSLQCHRVIHTGEKPFACAEC 358

  Fly   545 DHIFLTQKCLQRH 557
            ...|..::.|..|
 Frog   359 GKSFSLKRNLTNH 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pitaNP_611806.3 zf-AD 17..92 CDD:214871
COG5048 <281..506 CDD:227381 80/219 (37%)
C2H2 Zn finger 288..308 CDD:275368 6/19 (32%)
C2H2 Zn finger 316..336 CDD:275368 6/19 (32%)
C2H2 Zn finger 344..364 CDD:275368 8/19 (42%)
C2H2 Zn finger 372..388 CDD:275370 3/15 (20%)
C2H2 Zn finger 400..420 CDD:275368 7/19 (37%)
C2H2 Zn finger 428..448 CDD:275368 8/19 (42%)
C2H2 Zn finger 456..476 CDD:275368 10/19 (53%)
C2H2 Zn finger 486..506 CDD:275368 7/19 (37%)
znf470NP_001107698.2 COG5048 17..372 CDD:227381 93/273 (34%)
C2H2 Zn finger 19..39 CDD:275368
C2H2 Zn finger 47..67 CDD:275368
C2H2 Zn finger 75..95 CDD:275368
C2H2 Zn finger 103..123 CDD:275368 6/19 (32%)
C2H2 Zn finger 131..151 CDD:275368 6/19 (32%)
C2H2 Zn finger 159..179 CDD:275368 8/19 (42%)
C2H2 Zn finger 187..207 CDD:275368 4/19 (21%)
C2H2 Zn finger 215..235 CDD:275368 7/19 (37%)
C2H2 Zn finger 243..263 CDD:275368 8/19 (42%)
C2H2 Zn finger 271..291 CDD:275368 10/19 (53%)
C2H2 Zn finger 299..319 CDD:275368 7/19 (37%)
C2H2 Zn finger 327..347 CDD:275368 5/19 (26%)
C2H2 Zn finger 355..375 CDD:275368 5/17 (29%)
Blue background indicates that the domain is not in the aligned region.

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