DRSC/TRiP Functional Genomics Resources

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Protein Alignment pita and sens

DIOPT Version :10

Sequence 1:NP_611806.3 Gene:pita / 37730 FlyBaseID:FBgn0034878 Length:683 Species:Drosophila melanogaster
Sequence 2:NP_524818.1 Gene:sens / 45328 FlyBaseID:FBgn0002573 Length:541 Species:Drosophila melanogaster


Alignment Length:506 Identity:104/506 - (20%)
Similarity:169/506 - (33%) Gaps:172/506 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 IMAITAIEVYAGDGMPGHICLECRLLFEHCYRFKQMCKRAETLLRQYPLTGNWPSPLEKPRAPMT 111
            ::|..|.:...|..:|   .|...||:.....:.|....:.|.|.. |||     |: .|::|.:
  Fly    41 VIASAAAQKLNGRDLP---FLYNPLLYSSALLWPQFLLSSATALGT-PLT-----PM-TPKSPAS 95

  Fly   112 MVASKK---LLVVPAKTAE-----------------PSETPKKL-------------------LN 137
            :|..::   ..:.|.|..|                 ..:.|..|                   .|
  Fly    96 VVLGQRDRDFALTPEKEHELQMNNNNENSKQDYQEQDEDMPLNLSTKERITSDDSNRDQYHSSSN 160

  Fly   138 TMAKSSSQVIIEDVQVLESAMVTPRTVAG----SSPVPR----------------------RSHA 176
            ..::|||...:|.:..:.|..|||..::.    ||..|:                      |...
  Fly   161 NSSRSSSSSEVEQLHPMTSLNVTPPPLSAVNLKSSSTPQQQRQRSQGNIIWSPASMCERSARREQ 225

  Fly   177 YELKVDNNQELSMDDVQSMLEDMASELEKEFPDIPQKASPVKPKVLNKSSIRILNKGPAAPVEPR 241
            |.||::...:.....|..::...  :.|:....|....||:       ||:..........:|..
  Fly   226 YGLKMEEQGDEEEHQVDPIVRKF--KYERRTASISSLQSPI-------SSLSAPASNAVQDLEFE 281

  Fly   242 LATPKVKRDDSGNVAIVT----EVLDSDLPL---------------DDQDDPTKNA--------- 278
            :|..::....|..:|.:|    |:|...|.|               |:|....::|         
  Fly   282 VAQQQLYAHRSAFMAGLTGNNLELLTQHLKLKSEQPQQQQQQHRIKDEQQQDNRSAAALMNLVAA 346

  Fly   279 -------------------------------------EKVATDV--------------------- 285
                                                 :..||||                     
  Fly   347 AEFGYMRNQHQQPQQQQQQQLHHQQQPQQHQHQQQHPDSTATDVARRSSSSSSYQGENEEKRSGR 411

  Fly   286 -FPCPDCERSFPLQQLLEIHRLNHTRSRSFQCLLCEKSFFSKYDLAKHNFVHTGERPFKCAICSK 349
             |.|..|.:||.....|..|.|.|:.:|.:.|..|.|.|..|.|:.||.::||||:|.||.:|.|
  Fly   412 NFQCKQCGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTYIHTGEKPHKCTVCLK 476

  Fly   350 AFTRKALLHRHERTHTDVPKFICVYCEKPFLSRQEMEKHAE-RHQKKRPFQ 399
            ||::.:.|..|.|.||....|.|..|::.|..:.::.:|.| ||::..|.:
  Fly   477 AFSQSSNLITHMRKHTGYKPFGCHLCDQSFQRKVDLRRHRESRHEEAPPVE 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pitaNP_611806.3 zf-AD 17..92 CDD:214871 10/44 (23%)
COG5048 <281..506 CDD:227381 47/142 (33%)
C2H2 Zn finger 288..308 CDD:275368 7/19 (37%)
C2H2 Zn finger 316..336 CDD:275368 8/19 (42%)
C2H2 Zn finger 344..364 CDD:275368 8/19 (42%)
C2H2 Zn finger 372..388 CDD:275370 3/15 (20%)
C2H2 Zn finger 400..420 CDD:275368 104/506 (21%)
C2H2 Zn finger 428..448 CDD:275368
C2H2 Zn finger 456..476 CDD:275368
C2H2 Zn finger 486..506 CDD:275368
sensNP_524818.1 zf-C2H2 413..435 CDD:395048 8/21 (38%)
C2H2 Zn finger 415..435 CDD:275368 7/19 (37%)
zf-C2H2 441..463 CDD:395048 8/21 (38%)
C2H2 Zn finger 443..463 CDD:275368 8/19 (42%)
zf-H2C2_2 455..480 CDD:463886 14/24 (58%)
C2H2 Zn finger 471..491 CDD:275368 8/19 (42%)
zf-H2C2_2 483..506 CDD:463886 8/22 (36%)
C2H2 Zn finger 499..516 CDD:275368 3/16 (19%)
Blue background indicates that the domain is not in the aligned region.

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