DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pita and Odj

DIOPT Version :10

Sequence 1:NP_611806.3 Gene:pita / 37730 FlyBaseID:FBgn0034878 Length:683 Species:Drosophila melanogaster
Sequence 2:NP_650661.1 Gene:Odj / 42145 FlyBaseID:FBgn0038551 Length:430 Species:Drosophila melanogaster


Alignment Length:641 Identity:133/641 - (20%)
Similarity:207/641 - (32%) Gaps:235/641 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 MLTEKRVCRFCLTEQKLASIFEE-NPRVKTTANLPLQIMAITAIEVYAGDGMPGHICLECRLLFE 74
            |.||.|:|...:......:|||: |.|::      :.|..||.:|:...:.:|.|||..|.|...
  Fly     1 MSTECRICGERIFTPHPKNIFEKRNHRIR------MAIEQITGLEIVLENMLPQHICACCLLDLT 59

  Fly    75 HCYRFKQMCKRAETLLRQYPLTGNWPSPLEKPRAPMTMVASKKLLVVPAKTAEPSETPKKLLNTM 139
            ....|:|.|......|.|                   .::||..:   |....|..:| .|.:.:
  Fly    60 QAVAFRQRCLETHANLHQ-------------------RISSKAGV---ASKGSPEVSP-VLSDPL 101

  Fly   140 AKSSSQVIIEDVQVLESAMVTPRTVAGSSPVPRRSHAYELKVDNNQELSMDDVQSMLED------ 198
            .|.         :||:..:.|             ....|| :|::::| |||.:..|||      
  Fly   102 LKR---------EVLDDTVDT-------------EDDKEL-LDDDKDL-MDDDKDFLEDEKPILR 142

  Fly   199 --MASELEKEFPDIPQKASP-VKPKVLNKSSIRILNKGPAAPVE----PRLATPKVKRDDSGNVA 256
              .|.::..|..:.|.:.|| |:.|.|....:...:..|..|.|    ||...||.|.|.|    
  Fly   143 YPPAKKIRIEDQNFPNRQSPRVRVKRLRVPVVEKADSPPPPPREHVRKPRKRRPKPKVDRS---- 203

  Fly   257 IVTEVLDSDLPLDDQDDPTKNAEKVATDVFPCPDCERSFPLQQLLEIHRLNHTRSRSFQCLLCEK 321
                                      ...:.|..|..||.....::.|:|.|...: |.|..|.:
  Fly   204 --------------------------IKRYVCDQCGWSFNDHSNMKDHKLRHFEEK-FSCDECGR 241

  Fly   322 SFFSKYDLAKHNFV-HTGERPFKCAICSKAFTRKALLHRHERTHTDVPKFICVYCEKPFLSRQEM 385
            .|::...|..|..| |.||:|:.|..|...|.......||||                       
  Fly   242 KFYTMPLLRLHIRVHHKGEKPYVCKFCGMGFANSPSRCRHER----------------------- 283

  Fly   386 EKHAERHQKKRPFQCGVCTKSFAFKQGLERHETVHSTNLP--FPCQHCERSFSTASKLARHLVAH 448
                :.|..:....|.:|.|.|..::|..:||..|.::.|  ..|..|.:.|..|..|.||    
  Fly   284 ----QMHANELVHPCKICGKRFNSEKGRLKHEEGHKSDQPDVHICLTCNKEFKEAQFLHRH---- 340

  Fly   449 AGKRAYPCKYCHKSYMLSHHLSRHLRTHTQTSDASFVCSECKVSYSNYNDLLDHALIHATASLKC 513
                 |..||         |..|                                          
  Fly   341 -----YSTKY---------HRKR------------------------------------------ 349

  Fly   514 PMCRKQIEDIDSVESHMDQHKQSERHACEFCDHIFLTQKCLQRHIEDDHVVEMEPYQNEFEDDGE 578
                     ::.:.:...:..|||....||..:                   ||          |
  Fly   350 ---------VNLLVNGPKEEFQSEVDPAEFPGY-------------------ME----------E 376

  Fly   579 GEGGVDEKEEHLDDFEDMDNVKQEEFVT-EYLED------DALYEDHLDDSDESFT 627
            |:..:::.:..||..  :||:.:|::.. |.|:|      |..||:.:.|.:|.:|
  Fly   377 GQAEMEDNQAELDVM--LDNIDEEQYEDHEVLQDEDANFEDFEYEEAIPDGEELYT 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pitaNP_611806.3 zf-AD 17..92 CDD:214871 20/75 (27%)
COG5048 <281..506 CDD:227381 47/227 (21%)
C2H2 Zn finger 288..308 CDD:275368 6/19 (32%)
C2H2 Zn finger 316..336 CDD:275368 6/20 (30%)
C2H2 Zn finger 344..364 CDD:275368 7/19 (37%)
C2H2 Zn finger 372..388 CDD:275370 0/15 (0%)
C2H2 Zn finger 400..420 CDD:275368 7/19 (37%)
C2H2 Zn finger 428..448 CDD:275368 7/19 (37%)
C2H2 Zn finger 456..476 CDD:275368 4/19 (21%)
C2H2 Zn finger 486..506 CDD:275368 0/19 (0%)
OdjNP_650661.1 zf-AD 5..78 CDD:462262 22/97 (23%)
C2H2 Zn finger 209..229 CDD:275368 6/19 (32%)
SUF4-like 212..>257 CDD:411020 13/45 (29%)
C2H2 Zn finger 212..229 CDD:411020 5/16 (31%)
C2H2 Zn finger 236..256 CDD:411020 5/19 (26%)
C2H2 Zn finger 236..256 CDD:275368 5/19 (26%)
zf-H2C2_2 249..274 CDD:463886 10/24 (42%)
C2H2 Zn finger 265..283 CDD:275368 5/17 (29%)
C2H2 Zn finger 298..314 CDD:275368 5/15 (33%)
zf-C2H2_jaz 322..347 CDD:432381 10/42 (24%)
C2H2 Zn finger 324..343 CDD:275368 8/27 (30%)

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