DRSC/TRiP Functional Genomics Resources

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Protein Alignment pita and CG14710

DIOPT Version :9

Sequence 1:NP_611806.3 Gene:pita / 37730 FlyBaseID:FBgn0034878 Length:683 Species:Drosophila melanogaster
Sequence 2:NP_650092.4 Gene:CG14710 / 41393 FlyBaseID:FBgn0037920 Length:415 Species:Drosophila melanogaster


Alignment Length:502 Identity:108/502 - (21%)
Similarity:177/502 - (35%) Gaps:156/502 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 CRFCLTEQKLASIFEENPRV-----KTTANLPLQIMAITAIEVYAGDGMPGHICLECRLLFEHCY 77
            ||.||.:      |||:..:     |..::|..::.....|.|.....:|...|..|....:..:
  Fly    10 CRICLGD------FEESQMICLFGDKGESDLRKKLELCCRIRVRQSPQLPEKACNSCCEFVQMWF 68

  Fly    78 RFKQMCKRAETLLRQYPLTGNW-PSPLEKPRAPMTMVASKKLLVVPAKTAE-------------- 127
            .|:|||..::..         | .|..|:|.|           :..|..||              
  Fly    69 NFRQMCLNSQVY---------WETSSSERPEA-----------LAQASDAEYMLYLYENLHLKLG 113

  Fly   128 PSETPKKLLNTMAKSSSQ--------------VIIEDVQVLESAMVTPRTVAGSSPVPRR---SH 175
            .....|:.:..:.:...|              :|.|.::..|.    |.|.:     |.:   ||
  Fly   114 TENQEKEEITAIEEGDEQQEDQSQEVLDFNGFIINESIEEDEE----PNTES-----PEQILISH 169

  Fly   176 AYELKVDNNQELSMDDVQSMLEDMAS-----ELEKEFPDIPQKASPVKPKVLNKSSIRILNKGPA 235
            ......|...|..:||...::|::::     |:|....::...::| .|    ..|.::..:.|.
  Fly   170 MDSYVDDQQMEELIDDKGELVEELSNANTFYEVEYGDEELLMSSAP-SP----HPSFKMDKQKPG 229

  Fly   236 APVEPRLATPKVKRDDSGNVAIVTEVLDSDLPLDDQDDPTKNAEKVATDVFPCPDCERSFPLQQL 300
            .|.:|. |..|.||.|.                        ||::....    |.|:        
  Fly   230 RPRKPD-AELKFKRKDI------------------------NAKERGNQ----PKCK-------- 257

  Fly   301 LEIHRLNHTRSRSFQCLLCEKSFFSKYDLAKHNFVHTGERPFKCAICSKAFTRKALLHRHERTHT 365
                     ....|.|:||...|:.|.....|...|:..:|.:|.||:|:|.:...|..|.|.||
  Fly   258 ---------EEEKFMCILCGNVFYKKSVFTAHMMTHSEYKPHQCEICNKSFRQMGELRAHIRRHT 313

  Fly   366 DVPKFICVYCEKPFLSRQEMEKHAERHQKKRPFQCGVCTKSFAFKQGLERHETVHSTNLPFPCQH 430
            ....:.|:||::.|..|.|.                            .|||.||:...|:.||.
  Fly   314 GDRPYKCMYCDRHFYDRSER----------------------------VRHERVHTNTRPYACQE 350

  Fly   431 CERSFSTASKLARHLVAHAGKRAYPCKYCHKSYMLSHHLSRHLRTHT 477
            |.::|:..:.|..|:::|:.::.|.|..|.||:.|.|.|..||:|.|
  Fly   351 CGKTFTHTAILKNHILSHSAQKNYNCGICCKSFTLLHQLKAHLQTLT 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pitaNP_611806.3 zf-AD 17..92 CDD:214871 18/78 (23%)
COG5048 <281..506 CDD:227381 52/197 (26%)
C2H2 Zn finger 288..308 CDD:275368 2/19 (11%)
C2H2 Zn finger 316..336 CDD:275368 6/19 (32%)
zf-H2C2_2 328..353 CDD:290200 8/24 (33%)
C2H2 Zn finger 344..364 CDD:275368 8/19 (42%)
C2H2 Zn finger 372..388 CDD:275370 6/15 (40%)
C2H2 Zn finger 400..420 CDD:275368 3/19 (16%)
C2H2 Zn finger 428..448 CDD:275368 6/19 (32%)
C2H2 Zn finger 456..476 CDD:275368 9/19 (47%)
C2H2 Zn finger 486..506 CDD:275368
HARE-HTH <566..625 CDD:294801
CG14710NP_650092.4 zf-AD 9..83 CDD:285071 19/87 (22%)
COG5048 <261..395 CDD:227381 48/161 (30%)
C2H2 Zn finger 264..284 CDD:275368 6/19 (32%)
zf-C2H2 290..312 CDD:278523 8/21 (38%)
C2H2 Zn finger 292..312 CDD:275368 8/19 (42%)
zf-H2C2_2 304..327 CDD:290200 8/22 (36%)
C2H2 Zn finger 320..340 CDD:275368 9/47 (19%)
zf-H2C2_2 335..357 CDD:290200 10/21 (48%)
C2H2 Zn finger 348..368 CDD:275368 6/19 (32%)
C2H2 Zn finger 376..395 CDD:275368 9/18 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446668
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2531
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.980

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