DRSC/TRiP Functional Genomics Resources

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Protein Alignment pita and CG31388

DIOPT Version :10

Sequence 1:NP_611806.3 Gene:pita / 37730 FlyBaseID:FBgn0034878 Length:683 Species:Drosophila melanogaster
Sequence 2:NP_650060.1 Gene:CG31388 / 41355 FlyBaseID:FBgn0051388 Length:446 Species:Drosophila melanogaster


Alignment Length:515 Identity:108/515 - (20%)
Similarity:196/515 - (38%) Gaps:110/515 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 VCRFC--LTEQKLA-SIFEENPRVKTTANLPLQIMAITAIEVYAGDGMPGHICLECRLLFEHCYR 78
            :||.|  :.:..:| ::|:     .:::::..||..:|.:::.....:|..:|.:|:...:....
  Fly     4 ICRTCSRMADPAVAKNLFD-----PSSSSVLRQIETLTNLQLKEDGKLPRFMCQDCQHDLQIAID 63

  Fly    79 FKQMCKRAETL----LRQYPLTGNWPSPLEKPRAPMTMVASKKLLVVPAKTAEPSETPKKLLNTM 139
            |:::|..|:.|    |||          :||.......:|.:.|          .:.|.:|.|. 
  Fly    64 FRRVCIEAQELLELQLRQ----------VEKEEEAFESLAEQWL----------DDCPDELSNL- 107

  Fly   140 AKSSSQVIIEDVQVLESAMVTPRTVAGSSPVPRRSHAYELKVD-NNQELSMDDVQSMLEDMASEL 203
                                        |||.:.:...:...| ..|:.:.|::.|:.....:|.
  Fly   108 ----------------------------SPVLQLNDRMDFIFDPEPQDKNTDELASIKTTTTTEY 144

  Fly   204 EKEFPDIPQKASPVKPKVLNKSSIRILNKGPAAPVEPRLATPKVKRDDSGNVAIVTEVLDSDLPL 268
            ...:..:   |||       :||             |.|:|.....::..::.:..|.......:
  Fly   145 MNAYQSV---ASP-------QSS-------------PELSTDSQLSNEHFDMGLSPESEPESEAI 186

  Fly   269 DDQDDPTKNAEKVATDVFPCPDCERSFPLQQLLEIHRLN-H--TRSRSFQCLLCEKSFFSKYDLA 330
            |::|..:.:.         |..|...|.....|::|:.: |  .....|.|..|::.|.|...|.
  Fly   187 DNRDTSSSHT---------CSKCGLEFENVDELKLHKYHLHDIPPDTKFVCDHCDEGFRSAAALT 242

  Fly   331 KH-NFVHTGERPF--KCAICSKAFTRKALLHRHERTHTDVP--KFICVYCEKPFLSRQEMEKHAE 390
            :| |.::.   |.  .|..|...|....||..|::.....|  :.:|..|.|...:...::.|..
  Fly   243 RHCNMINL---PLTHSCTKCKSQFHNHILLETHKQRCLRPPASQHVCHICGKHLTTAFNLKNHLV 304

  Fly   391 RHQKKRPFQCGVCTKSFAFKQGLERHETVHSTNLPFPCQH-CERSFSTASKLARHLVAH--AGKR 452
            ||...|..:|..|:.||.....|..|:..|:|..|:.|:: |.::|...|..:.|...|  |.||
  Fly   305 RHAGTRRHKCDQCSASFYTAAELCSHQKTHTTERPYICRYNCGKTFRFCSARSMHERVHMDASKR 369

  Fly   453 AYPCKYCHKSYMLSHHLSRHLRTHTQTSDASFVCSECKVSYSNYNDLLDHALIHATASLK 512
            .|.|:||.|||:.......|.:.|..|.|..  |..|::|:........|...:|..:|:
  Fly   370 IYQCEYCPKSYVTPSECRTHQKYHNLTRDHG--CEICRISFKTAKHYRSHLKSNAHKTLE 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pitaNP_611806.3 zf-AD 17..92 CDD:214871 16/81 (20%)
COG5048 <281..506 CDD:227381 62/235 (26%)
C2H2 Zn finger 288..308 CDD:275368 5/20 (25%)
C2H2 Zn finger 316..336 CDD:275368 7/20 (35%)
C2H2 Zn finger 344..364 CDD:275368 6/19 (32%)
C2H2 Zn finger 372..388 CDD:275370 3/15 (20%)
C2H2 Zn finger 400..420 CDD:275368 6/19 (32%)
C2H2 Zn finger 428..448 CDD:275368 5/20 (25%)
C2H2 Zn finger 456..476 CDD:275368 7/19 (37%)
C2H2 Zn finger 486..506 CDD:275368 4/19 (21%)
CG31388NP_650060.1 zf-AD 4..76 CDD:462262 15/76 (20%)
C2H2 Zn finger 228..254 CDD:275368 8/28 (29%)
C2H2 Zn finger 286..306 CDD:275368 4/19 (21%)
C2H2 Zn finger 314..334 CDD:275368 6/19 (32%)
C2H2 Zn finger 342..363 CDD:275368 5/20 (25%)
C2H2 Zn finger 373..393 CDD:275368 7/19 (37%)
zf-met 401..423 CDD:463736 4/21 (19%)
C2H2 Zn finger 401..419 CDD:275368 4/17 (24%)

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