DRSC/TRiP Functional Genomics Resources

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Protein Alignment pita and CG8301

DIOPT Version :9

Sequence 1:NP_611806.3 Gene:pita / 37730 FlyBaseID:FBgn0034878 Length:683 Species:Drosophila melanogaster
Sequence 2:NP_649915.1 Gene:CG8301 / 41160 FlyBaseID:FBgn0037717 Length:607 Species:Drosophila melanogaster


Alignment Length:593 Identity:133/593 - (22%)
Similarity:217/593 - (36%) Gaps:150/593 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 IEVYAGDGMPGHICLECRLLFEHCYRFKQMCKRAETLLRQ-YPLTGNWPSPLEKPRAPMTMVASK 116
            :::...||:|..||.:|...|.....|:..|:.|:..|.. |....  .|.||...     :..:
  Fly    50 LKISPNDGLPQKICSDCFTKFCSINAFRLACQEAQLKLSHIYDKID--ASSLEDDE-----IGQE 107

  Fly   117 KLLVVPAKTAEPSETPKKLL--------NTMAKSSSQVIIEDVQVLES---------------AM 158
            .|  .||:..:.:||.|...        |..|....::.::.|.:.|:               .:
  Fly   108 DL--EPAEEHQETETTKPTTTVSAETQPNNTASDPIEIFVDAVDIDEAEEEEEEEEQQQQYDEEV 170

  Fly   159 VTPRTVAGSSPVPRRSHA--YELKVDNNQELSMDDVQSMLEDM-----------ASELEKEFPDI 210
            ..|.|...:.|....|:|  :.|:...|.:|.    |.:||.:           ..|.|..|.|.
  Fly   171 EEPITDESAPPQLTISYACKFCLRPQENYQLQ----QLLLEHINASHDPEQPYNCPECEARFQDA 231

  Fly   211 PQKASPVKPKVLNKS-SIRILNKGPAAPVEPRLATPKVKRDDSGNVAIVTEVLDSDLPLDDQDDP 274
            ..:...:|...:.|. :..:..|               |..|..|:....|...|:         
  Fly   232 ASRTVHLKSSHVEKQHACGVCGK---------------KYGDRHNLRHHVEKYHSE--------- 272

  Fly   275 TKNAEKVATDVFPCPDCERSFPLQQLLEIHRLNHTRSRSFQCLL--CEKSFFSKYDLAKHNFVHT 337
                    || |.|..||:.|..::.|..|...|...|.|:|..  ||:.|.|:..|..|...|:
  Fly   273 --------TD-FECALCEKRFYTRKSLNYHMKWHNPDRQFKCRHSGCERLFISQRHLMCHEATHS 328

  Fly   338 --------------------------------GERPFKCAICSKAFTRKA-----LLHRHERTHT 365
                                            ||:|:|||.|::.|...|     :|.||....|
  Fly   329 GTSSRKSEHCGFCGKTFIHLKTLRWHIYRQHGGEKPYKCANCTEVFASYAEKRIHMLERHRENLT 393

  Fly   366 DVPKFICVYCEKPFLSRQEMEKHAERHQKKRP-----------------------FQCGVCTKSF 407
            .:.:..|:.|.:||.|..::..|......:||                       ||||.|::.|
  Fly   394 AIERSECMLCRQPFSSEPDLIHHMSAEHLQRPGAPIIANNKRVLQQKRERQYSGLFQCGSCSQRF 458

  Fly   408 AFKQGLERHETVHS-TNLPFPCQHCERSFSTASKLARHLVAHAGKRAYPCKYCHKSYMLSHHLSR 471
            ..|..||||..||| .:.|..|.||.:.|..|..:..|:..|..::...|..|.|::.|.:.|::
  Fly   459 NMKSALERHAAVHSEKDRPHACPHCSKRFKRAQDMKWHIKTHEKEKPNVCDVCGKAFALKYVLTQ 523

  Fly   472 HLRTHTQTSDASFVCSECKVSYSNYNDLLDHALIHATAS-LKCPMCRKQIEDIDSVESHMDQ-HK 534
            |..:| :..:.:|.|:.|..:|.....|..|...|...: .||.:|:::......:::||.: |.
  Fly   524 HRLSH-EVLEKNFKCNVCGRAYLFEKSLRLHQRTHTGKTYYKCDLCQERFVTHIKLKTHMQKAHA 587

  Fly   535 QSERHACE 542
            .|:.|:.:
  Fly   588 ASQPHSAD 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pitaNP_611806.3 zf-AD 17..92 CDD:214871 11/38 (29%)
COG5048 <281..506 CDD:227381 76/287 (26%)
C2H2 Zn finger 288..308 CDD:275368 6/19 (32%)
C2H2 Zn finger 316..336 CDD:275368 7/21 (33%)
zf-H2C2_2 328..353 CDD:290200 11/56 (20%)
C2H2 Zn finger 344..364 CDD:275368 8/24 (33%)
C2H2 Zn finger 372..388 CDD:275370 5/15 (33%)
C2H2 Zn finger 400..420 CDD:275368 9/19 (47%)
C2H2 Zn finger 428..448 CDD:275368 6/19 (32%)
C2H2 Zn finger 456..476 CDD:275368 6/19 (32%)
C2H2 Zn finger 486..506 CDD:275368 5/19 (26%)
HARE-HTH <566..625 CDD:294801
CG8301NP_649915.1 zf-AD 3..87 CDD:285071 10/36 (28%)
COG5048 198..>508 CDD:227381 80/346 (23%)
C2H2 Zn finger 221..241 CDD:275368 5/19 (26%)
C2H2 Zn finger 249..269 CDD:275368 5/34 (15%)
C2H2 Zn finger 277..297 CDD:275368 6/19 (32%)
C2H2 Zn finger 305..327 CDD:275368 7/21 (33%)
C2H2 Zn finger 338..359 CDD:275368 0/20 (0%)
C2H2 Zn finger 367..384 CDD:275368 5/16 (31%)
C2H2 Zn finger 400..420 CDD:275368 6/19 (32%)
C2H2 Zn finger 451..471 CDD:275368 9/19 (47%)
C2H2 Zn finger 480..500 CDD:275368 6/19 (32%)
C2H2 Zn finger 508..528 CDD:275368 6/19 (32%)
C2H2 Zn finger 537..557 CDD:275368 5/19 (26%)
C2H2 Zn finger 565..582 CDD:275368 2/16 (13%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449756
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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