DRSC/TRiP Functional Genomics Resources

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Protein Alignment pita and CG11247

DIOPT Version :9

Sequence 1:NP_611806.3 Gene:pita / 37730 FlyBaseID:FBgn0034878 Length:683 Species:Drosophila melanogaster
Sequence 2:NP_001097659.1 Gene:CG11247 / 40414 FlyBaseID:FBgn0037120 Length:522 Species:Drosophila melanogaster


Alignment Length:445 Identity:109/445 - (24%)
Similarity:176/445 - (39%) Gaps:77/445 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 VDNNQELSMDDVQSMLEDMASELEKEFPDIPQKASPVKPKVLNKSSIRILNKGPAAPVEPRLATP 245
            |.:.:.:|.:|..|:|.|....|..  |...:::||                ||...::.|.::.
  Fly     2 VRSRRSVSKEDAVSLLTDSGISLSS--PPAARESSP----------------GPTLAIKRRKSSL 48

  Fly   246 KVKRDDSGNVAIVTEVLDSDLPLDDQDD---------------PTKNAEKVA----------TDV 285
            ...||     |.|.|..|.....|.:||               |.|....|.          ||:
  Fly    49 ASLRD-----ACVDEEEDDGGEQDSKDDDYVQPQLKKSARKGEPVKRKHHVCSQCSKEFGGKTDL 108

  Fly   286 ------------FPCPDCERSFPLQQLLEIH-RLNHTRSRSFQCLLCEKSFFSKYDLAKHNFVHT 337
                        ..|.||.:|:.....|:.| ...|...:.|.|..|.|||..|..|..|..:|:
  Fly   109 QRHMLIHSDERPHKCKDCGKSYRQAVNLKNHITTAHEHRKQFVCSQCPKSFALKERLRLHMRLHS 173

  Fly   338 GERPFKCAICSKAFTRKALLHRHERTH--TDVPKFICVYCEKPFLSRQEMEKHAERHQKKRPFQC 400
            ||:|:.|.:|.|.|.|...|.:|..:|  |.:.:|.|..|...|.:...:..|.|||::....:|
  Fly   174 GEKPYPCDLCDKKFARGGQLQQHMVSHHKTSIQQFNCTKCSASFSTNANLRVHMERHEQGMEHRC 238

  Fly   401 GVCTKSFAFKQGLERH-ETVHSTNLPFPCQHCERSFSTASKLARHLVAHAGKRAYPCKYCHKSYM 464
            .:|...||.:..|..| ...|.....|.|:.|.:.......||.|:..|...:.:.|:.|:..:.
  Fly   239 SICENQFANELALRAHINQEHHKLTQFECEICHKMIEPDEDLATHMQRHTAVKTHVCEVCNTYFT 303

  Fly   465 LSHHLSRHLRTHTQTSDASFVCSECKVSYSNYNDLLDHALIH-ATASLKCPMCRKQI--EDIDSV 526
            .....:.|:|.|  |.:..:.|..|..::::.:.|..|...| .....:|.:|..::  ..:..:
  Fly   304 QKSQYNVHMRMH--TGERPYQCRICHQTFAHSSVLKLHIRKHTGEKPFRCQLCEDEVAFSQLAHL 366

  Fly   527 ESHMDQ-HKQSERHACEFCDHIFLTQKCLQRHIEDDHVVEM-----EPYQNEFED 575
            ::||.: |||.:.:.||.|...|..:..||.|:|  |..:.     :|..|:.||
  Fly   367 KNHMKKIHKQQKPYMCEGCHDFFKIKVELQSHVE--HCAKCPVDGDKPSGNQSED 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pitaNP_611806.3 zf-AD 17..92 CDD:214871
COG5048 <281..506 CDD:227381 64/250 (26%)
C2H2 Zn finger 288..308 CDD:275368 6/20 (30%)
C2H2 Zn finger 316..336 CDD:275368 8/19 (42%)
zf-H2C2_2 328..353 CDD:290200 10/24 (42%)
C2H2 Zn finger 344..364 CDD:275368 7/19 (37%)
C2H2 Zn finger 372..388 CDD:275370 3/15 (20%)
C2H2 Zn finger 400..420 CDD:275368 6/20 (30%)
C2H2 Zn finger 428..448 CDD:275368 5/19 (26%)
C2H2 Zn finger 456..476 CDD:275368 4/19 (21%)
C2H2 Zn finger 486..506 CDD:275368 4/19 (21%)
HARE-HTH <566..625 CDD:294801 4/15 (27%)
CG11247NP_001097659.1 COG5048 <88..247 CDD:227381 44/158 (28%)
C2H2 Zn finger 95..115 CDD:275368 2/19 (11%)
zf-H2C2_2 107..132 CDD:290200 5/24 (21%)
C2H2 Zn finger 123..144 CDD:275368 6/20 (30%)
C2H2 Zn finger 152..172 CDD:275368 8/19 (42%)
zf-H2C2_2 165..189 CDD:290200 10/23 (43%)
C2H2 Zn finger 180..200 CDD:275368 7/19 (37%)
COG5048 <192..369 CDD:227381 39/178 (22%)
C2H2 Zn finger 210..230 CDD:275370 5/19 (26%)
C2H2 Zn finger 238..260 CDD:275371 6/21 (29%)
C2H2 Zn finger 267..287 CDD:275368 5/19 (26%)
C2H2 Zn finger 295..315 CDD:275368 4/19 (21%)
zf-H2C2_2 309..332 CDD:290200 6/24 (25%)
C2H2 Zn finger 323..343 CDD:275368 4/19 (21%)
C2H2 Zn finger 351..374 CDD:275368 4/22 (18%)
C2H2 Zn finger 382..399 CDD:275368 6/16 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446669
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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