DRSC/TRiP Functional Genomics Resources

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Protein Alignment pita and CG11247

DIOPT Version :10

Sequence 1:NP_611806.3 Gene:pita / 37730 FlyBaseID:FBgn0034878 Length:683 Species:Drosophila melanogaster
Sequence 2:NP_649351.2 Gene:CG11247 / 40414 FlyBaseID:FBgn0037120 Length:522 Species:Drosophila melanogaster


Alignment Length:445 Identity:109/445 - (24%)
Similarity:176/445 - (39%) Gaps:77/445 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 VDNNQELSMDDVQSMLEDMASELEKEFPDIPQKASPVKPKVLNKSSIRILNKGPAAPVEPRLATP 245
            |.:.:.:|.:|..|:|.|....|..  |...:::||                ||...::.|.::.
  Fly     2 VRSRRSVSKEDAVSLLTDSGISLSS--PPAARESSP----------------GPTLAIKRRKSSL 48

  Fly   246 KVKRDDSGNVAIVTEVLDSDLPLDDQDD---------------PTKNAEKVA----------TDV 285
            ...||     |.|.|..|.....|.:||               |.|....|.          ||:
  Fly    49 ASLRD-----ACVDEEEDDGGEQDSKDDDYVQPQLKKSARKGEPVKRKHHVCSQCSKEFGGKTDL 108

  Fly   286 ------------FPCPDCERSFPLQQLLEIH-RLNHTRSRSFQCLLCEKSFFSKYDLAKHNFVHT 337
                        ..|.||.:|:.....|:.| ...|...:.|.|..|.|||..|..|..|..:|:
  Fly   109 QRHMLIHSDERPHKCKDCGKSYRQAVNLKNHITTAHEHRKQFVCSQCPKSFALKERLRLHMRLHS 173

  Fly   338 GERPFKCAICSKAFTRKALLHRHERTH--TDVPKFICVYCEKPFLSRQEMEKHAERHQKKRPFQC 400
            ||:|:.|.:|.|.|.|...|.:|..:|  |.:.:|.|..|...|.:...:..|.|||::....:|
  Fly   174 GEKPYPCDLCDKKFARGGQLQQHMVSHHKTSIQQFNCTKCSASFSTNANLRVHMERHEQGMEHRC 238

  Fly   401 GVCTKSFAFKQGLERH-ETVHSTNLPFPCQHCERSFSTASKLARHLVAHAGKRAYPCKYCHKSYM 464
            .:|...||.:..|..| ...|.....|.|:.|.:.......||.|:..|...:.:.|:.|:..:.
  Fly   239 SICENQFANELALRAHINQEHHKLTQFECEICHKMIEPDEDLATHMQRHTAVKTHVCEVCNTYFT 303

  Fly   465 LSHHLSRHLRTHTQTSDASFVCSECKVSYSNYNDLLDHALIH-ATASLKCPMCRKQI--EDIDSV 526
            .....:.|:|.|  |.:..:.|..|..::::.:.|..|...| .....:|.:|..::  ..:..:
  Fly   304 QKSQYNVHMRMH--TGERPYQCRICHQTFAHSSVLKLHIRKHTGEKPFRCQLCEDEVAFSQLAHL 366

  Fly   527 ESHMDQ-HKQSERHACEFCDHIFLTQKCLQRHIEDDHVVEM-----EPYQNEFED 575
            ::||.: |||.:.:.||.|...|..:..||.|:|  |..:.     :|..|:.||
  Fly   367 KNHMKKIHKQQKPYMCEGCHDFFKIKVELQSHVE--HCAKCPVDGDKPSGNQSED 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pitaNP_611806.3 zf-AD 17..92 CDD:214871
COG5048 <281..506 CDD:227381 64/250 (26%)
C2H2 Zn finger 288..308 CDD:275368 6/20 (30%)
C2H2 Zn finger 316..336 CDD:275368 8/19 (42%)
C2H2 Zn finger 344..364 CDD:275368 7/19 (37%)
C2H2 Zn finger 372..388 CDD:275370 3/15 (20%)
C2H2 Zn finger 400..420 CDD:275368 6/20 (30%)
C2H2 Zn finger 428..448 CDD:275368 5/19 (26%)
C2H2 Zn finger 456..476 CDD:275368 4/19 (21%)
C2H2 Zn finger 486..506 CDD:275368 4/19 (21%)
CG11247NP_649351.2 COG5048 <88..247 CDD:227381 44/158 (28%)
C2H2 Zn finger 95..115 CDD:275368 2/19 (11%)
C2H2 Zn finger 123..144 CDD:275368 6/20 (30%)
C2H2 Zn finger 152..172 CDD:275368 8/19 (42%)
C2H2 Zn finger 180..200 CDD:275368 7/19 (37%)
COG5048 <192..369 CDD:227381 39/178 (22%)
C2H2 Zn finger 210..230 CDD:275370 5/19 (26%)
C2H2 Zn finger 238..260 CDD:275371 6/21 (29%)
C2H2 Zn finger 267..287 CDD:275368 5/19 (26%)
C2H2 Zn finger 295..315 CDD:275368 4/19 (21%)
C2H2 Zn finger 323..343 CDD:275368 4/19 (21%)
C2H2 Zn finger 351..374 CDD:275368 4/22 (18%)
C2H2 Zn finger 382..399 CDD:275368 6/16 (38%)
Blue background indicates that the domain is not in the aligned region.

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