DRSC/TRiP Functional Genomics Resources

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Protein Alignment pita and CG30431

DIOPT Version :9

Sequence 1:NP_611806.3 Gene:pita / 37730 FlyBaseID:FBgn0034878 Length:683 Species:Drosophila melanogaster
Sequence 2:NP_610211.1 Gene:CG30431 / 35549 FlyBaseID:FBgn0050431 Length:418 Species:Drosophila melanogaster


Alignment Length:506 Identity:116/506 - (22%)
Similarity:189/506 - (37%) Gaps:147/506 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 VCRFCLTEQK--LASIFEENPRVKTTANLPLQIMAIT-AIEVYAGDGMPGHICLECRLLFEHCYR 78
            |||.||.||.  ..|:::      .::.|.:::.|:. |:.:..||.:...||..|.........
  Fly    11 VCRCCLLEQPPLYHSLYD------ASSQLAVELKALAPALRLEHGDNLTDVICDLCLRRLHDARD 69

  Fly    79 FKQMCKRAETLLRQYPLTGNWPSPLEKPRAPMTMVASKKLLVVPAKTAEPSETPKKLLNTMAKSS 143
            |::.|:.:|.:||.  ...:|.                                    :|:|...
  Fly    70 FQRRCEHSEQVLRM--RHEHWK------------------------------------HTVAVGD 96

  Fly   144 S-------QVIIEDVQVLESAMVTPRTVAGSSPVPRRSHAYELKVDNNQELSMDDVQSMLEDMAS 201
            :       :.:..:|..||..|..|  :..|.||   :|...|       :...|.:|:....:|
  Fly    97 ALALDDVLECLEREVGSLEGPMSVP--LQASKPV---AHVAPL-------METVDFESLDFQDSS 149

  Fly   202 ELEKEFPDI----------------PQKAS--PVKPKVLNKSSIRILNKGPAAPVEPRLATPKVK 248
            ..|.:.|..                |:.|.  .|:|....:||   ....|.|..:|::...:.:
  Fly   150 HSEHDIPSYWESSVDSGSLNTPHHQPETAELFAVEPPTPPESS---EEPAPDAAEKPKMRRARPR 211

  Fly   249 RDDSGNVAIVTEVLDSDLPLDDQDDPTKNAEKVAT------DVFPCPDCERSFPLQQLLEIH--R 305
            :|:                       .|..|:.|:      .:.|||:||:.|.....|::|  .
  Fly   212 QDN-----------------------VKPKERKASGAVHPRSLHPCPECEKKFTRNFQLKLHMTA 253

  Fly   306 LNHTRSRSFQCLLCEKSFFSKYDLAKH-NFVHTGERPFKCAICSKAFTRKALLHRHERTHTDVPK 369
            ::......:||..|.|:|.|::.|..| ..||:.||||.|..|.:.|..:..|..|.||||.   
  Fly   254 VHGMGEMRYQCEECRKNFASRHSLRYHVKSVHSTERPFGCQHCDRRFILRTQLLSHLRTHTG--- 315

  Fly   370 FICVYCEKPFLSRQEMEKHAERHQKKRPFQCGVCTKSFAFKQGLERHETVHSTNL--PFPCQHCE 432
                                  ..|.|.|:|..|:||:..|..|..|...|:.|:  ||.|..|.
  Fly   316 ----------------------EAKPRIFECQRCSKSWPTKSDLRTHMRSHNPNMERPFKCDRCS 358

  Fly   433 RSFSTASKLARHLVAHAGKRAYPCKYCHKSYMLSHHLSRHL-RTHTQTSDA 482
            ::|.|...|..||:.|.|::.:.|:||.|.|....:|:.|: |.|....:|
  Fly   359 KAFFTRGHLNSHLLVHTGEKPFACEYCDKCYQSVGNLNNHMVRLHADIIEA 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pitaNP_611806.3 zf-AD 17..92 CDD:214871 20/77 (26%)
COG5048 <281..506 CDD:227381 65/214 (30%)
C2H2 Zn finger 288..308 CDD:275368 7/21 (33%)
C2H2 Zn finger 316..336 CDD:275368 7/20 (35%)
zf-H2C2_2 328..353 CDD:290200 11/25 (44%)
C2H2 Zn finger 344..364 CDD:275368 6/19 (32%)
C2H2 Zn finger 372..388 CDD:275370 0/15 (0%)
C2H2 Zn finger 400..420 CDD:275368 7/19 (37%)
C2H2 Zn finger 428..448 CDD:275368 7/19 (37%)
C2H2 Zn finger 456..476 CDD:275368 8/20 (40%)
C2H2 Zn finger 486..506 CDD:275368
HARE-HTH <566..625 CDD:294801
CG30431NP_610211.1 zf-AD 11..82 CDD:285071 19/76 (25%)
C2H2 Zn finger 234..255 CDD:275368 7/20 (35%)
C2H2 Zn finger 264..285 CDD:275368 7/20 (35%)
C2H2 Zn finger 293..313 CDD:275368 6/19 (32%)
zf-C2H2_8 305..373 CDD:292531 27/92 (29%)
C2H2 Zn finger 324..344 CDD:275368 7/19 (37%)
C2H2 Zn finger 354..374 CDD:275368 7/19 (37%)
zf-H2C2_2 366..389 CDD:290200 9/22 (41%)
C2H2 Zn finger 382..403 CDD:275368 8/20 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446665
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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