DRSC/TRiP Functional Genomics Resources

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Protein Alignment pita and CG17568

DIOPT Version :9

Sequence 1:NP_611806.3 Gene:pita / 37730 FlyBaseID:FBgn0034878 Length:683 Species:Drosophila melanogaster
Sequence 2:NP_609951.2 Gene:CG17568 / 35198 FlyBaseID:FBgn0032763 Length:513 Species:Drosophila melanogaster


Alignment Length:544 Identity:119/544 - (21%)
Similarity:196/544 - (36%) Gaps:131/544 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 CRFCLTEQKLASI---FEENPRVKTTANLPLQIMAITAIEVYAGDGMPGHICLECRLLF------ 73
            ||.|..:....::   ..||.:......|.:.|.....:::...|.:...:|.||..|.      
  Fly    11 CRLCAKDDAHGNVKVQMNENSQGNWDNVLIMAIRKYFEVQMQLEDELSSVLCTECYTLISELIDF 75

  Fly    74 -EHCYRFK---QMCKRAET----------LLRQYPLTGNWPSPLEKPRAPMTMVASKKLLVVPAK 124
             ||..:.:   ::.:|.||          |.:|:.|..:..:.:.||              :||.
  Fly    76 AEHVTKVQDIFEVLRRTETDGDQEMDVAALRQQFGLCDDDWTHIIKP--------------IPAL 126

  Fly   125 TAEPS---ETPKKLLN--TMAKSSSQVIIEDVQVLESAMVTPRTVAGSSPVPRRSHAYELKVDNN 184
            ..|..   :.|.:||.  .:|::|||          ...::.||..        :|..:.|.:..
  Fly   127 EMESDNVYQKPAELLKDFPLAETSSQ----------EMEISKRTTT--------THLIQTKKNVE 173

  Fly   185 QELS----MDDVQSMLEDMASELEKE--FPDIPQKASPVKPKVLNKSSIRILNKGPAAPVEPRL- 242
            .|:.    :|....:||...|:|:.|  ..::||:...                      :||| 
  Fly   174 MEIPKQEFIDLGPILLEKNTSQLDMEDVLDELPQEELS----------------------QPRLD 216

  Fly   243 --ATPKVKRDDSGNVAIVTEVLDS------DLPLDDQ------DDPTKNA------EKVATDVFP 287
              .:|....:|     :.:|:|||      .||:|.|      ...|.|.      ||.......
  Fly   217 STTSPASMEND-----VKSEMLDSCEGDDDFLPVDGQLMDLVAVATTPNTLESTAEEKAKRGRMD 276

  Fly   288 CPDCERSFPLQQLLEIHRLNHTR---------SRSFQCLLCEKSFFSKYDLAKH-NFVHTGERPF 342
            |..|.:.:..:...|.|.....|         ..:..|.:|.|:..|...|..| ..:|...:|:
  Fly   277 CEKCGKVYRNRASYEKHLERECRRIERRVKVDKTTTTCDICNKTLSSATALKLHKEGIHQNVKPY 341

  Fly   343 KCAICSKAFTRKALLHRHERTHTDVPKFICVYCEKPFLSRQEMEKHAERHQKKRPFQCGVCTKSF 407
            .|..|.|.......|:.|:..||:...|.|..|:..|.:|..::.|.:.|.:. .|.|.:|.|..
  Fly   342 ICDSCGKQLKTITALNEHKLVHTESRPFECTVCKAGFKNRARLKAHYQIHAEP-SFVCNICGKKL 405

  Fly   408 AFKQGLERHETVHSTNLPFPCQHCERSFSTASKLARHLVAHAGKRAYPCKYCHKSYML-----SH 467
            ..::....|:.||:......|..|...|..:..|..||::|.|.|.|.|.||.||:..     ||
  Fly   406 QTRRTWNMHKVVHTEERRLKCDVCGALFKRSKTLKTHLLSHTGLRPYVCNYCGKSFACNANCRSH 470

  Fly   468 HLSRHLRTHTQTSDASFVCSECKV 491
            .|.:|.: ..|..|.:.:.|...|
  Fly   471 KLKKHPQ-EVQQEDGARLPSRLNV 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pitaNP_611806.3 zf-AD 17..92 CDD:214871 18/96 (19%)
COG5048 <281..506 CDD:227381 57/226 (25%)
C2H2 Zn finger 288..308 CDD:275368 4/19 (21%)
C2H2 Zn finger 316..336 CDD:275368 6/20 (30%)
zf-H2C2_2 328..353 CDD:290200 7/25 (28%)
C2H2 Zn finger 344..364 CDD:275368 5/19 (26%)
C2H2 Zn finger 372..388 CDD:275370 4/15 (27%)
C2H2 Zn finger 400..420 CDD:275368 4/19 (21%)
C2H2 Zn finger 428..448 CDD:275368 6/19 (32%)
C2H2 Zn finger 456..476 CDD:275368 9/24 (38%)
C2H2 Zn finger 486..506 CDD:275368 2/6 (33%)
HARE-HTH <566..625 CDD:294801
CG17568NP_609951.2 zf-AD 10..87 CDD:214871 14/75 (19%)
COG5048 <313..471 CDD:227381 45/158 (28%)
C2H2 Zn finger 314..335 CDD:275368 6/20 (30%)
C2H2 Zn finger 343..363 CDD:275368 5/19 (26%)
C2H2 Zn finger 371..391 CDD:275368 5/19 (26%)
C2H2 Zn finger 398..418 CDD:275368 4/19 (21%)
C2H2 Zn finger 426..446 CDD:275368 6/19 (32%)
zf-H2C2_2 439..463 CDD:290200 12/23 (52%)
C2H2 Zn finger 454..475 CDD:275368 8/20 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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