DRSC/TRiP Functional Genomics Resources

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Protein Alignment pita and Kr-h1

DIOPT Version :9

Sequence 1:NP_611806.3 Gene:pita / 37730 FlyBaseID:FBgn0034878 Length:683 Species:Drosophila melanogaster
Sequence 2:NP_477466.1 Gene:Kr-h1 / 33861 FlyBaseID:FBgn0266450 Length:845 Species:Drosophila melanogaster


Alignment Length:470 Identity:121/470 - (25%)
Similarity:177/470 - (37%) Gaps:98/470 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 KQMCKRAETLLRQYPLTGNWPSPLEKPRAPMTMVASKKLLVVPAKTAEPSETPKK--------LL 136
            |.:.|::.|.|            |:..::|...||.||   .|||   .|.|.|.        |:
  Fly    19 KDVLKKSGTEL------------LDISKSPAKAVAVKK---SPAK---DSATTKMVYYSANQLLI 65

  Fly   137 NTMAKSSSQVIIEDVQVLESAMVTPRTVA-GSSPVPRRSHAYELKVDNNQELSMDDVQSMLEDMA 200
            .|...|.:|..:   ||......|..:|. |..|...:...:|| :...|:..|   |..|:|..
  Fly    66 KTEQSSQAQFCL---QVPPPLTATTTSVGLGVPPSGGQQEHFEL-LQTPQQRQM---QLQLQDQH 123

  Fly   201 SELEKEFPDIPQKASPVKPKVLNKSSIRILNKGP-AAPVEPRLAT-------------------- 244
            .:.:::|..........:.:...:....|.|..| |||...|:.|                    
  Fly   124 QQEQQQFVSYQLAIQQHQKQQQQQQHESITNAAPTAAPSAQRIKTEPVGGFPASAAVVSQVRKPS 188

  Fly   245 ---PKVKRDDSG------------------------------NVA-----IVTEVLDSDLPLDDQ 271
               |:.|.|..|                              .||     ...|:.|:.||:...
  Fly   189 ASKPQFKCDQCGMTFGSKSAHTSHTKSHSKNQDLSLNGASGAGVAAPVSTAAIELNDAGLPVGIP 253

  Fly   272 DDPT-KNAEKVA--TDVFPCPDCERSFPLQQLLEIHRLNHTRSRSFQCLLCEKSFFSKYDLAKHN 333
            ..|| |....||  .|.:.|..|:::|.:...|..|...||..|.|:|..|.|.|..|.:|..|.
  Fly   254 KSPTIKPLANVAAGADPYQCNVCQKTFAVPARLIRHYRTHTGERPFECEFCHKLFSVKENLQVHR 318

  Fly   334 FVHTGERPFKCAICSKAFTRKALLHRHERTHTDVPKFICVYCEKPFLSRQEMEKHAERHQKKRPF 398
            .:||.|||:||.:|.:||.....||||.|.||......|..|||.|:...::..|...|..::|:
  Fly   319 RIHTKERPYKCDVCGRAFEHSGKLHRHMRIHTGERPHKCSVCEKTFIQSGQLVIHMRTHTGEKPY 383

  Fly   399 QCGV--CTKSFAFKQGLERHETVHSTNLPFPCQHCERSFSTASKLARHLVAHAGKRAYPCKYCHK 461
            :|..  |.|.|...:.|:.|...|:...|:.|..|.|.|.....|..|.|.|.|.:.|.|..|.:
  Fly   384 KCPEPGCGKGFTCSKQLKVHSRTHTGEKPYHCDICFRDFGYNHVLKLHRVQHYGSKCYKCTICDE 448

  Fly   462 SYMLSHHLSRHLRTH 476
            ::.....:..|::.|
  Fly   449 TFKNKKEMEAHIKGH 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pitaNP_611806.3 zf-AD 17..92 CDD:214871 4/11 (36%)
COG5048 <281..506 CDD:227381 66/200 (33%)
C2H2 Zn finger 288..308 CDD:275368 5/19 (26%)
C2H2 Zn finger 316..336 CDD:275368 7/19 (37%)
zf-H2C2_2 328..353 CDD:290200 12/24 (50%)
C2H2 Zn finger 344..364 CDD:275368 9/19 (47%)
C2H2 Zn finger 372..388 CDD:275370 5/15 (33%)
C2H2 Zn finger 400..420 CDD:275368 6/21 (29%)
C2H2 Zn finger 428..448 CDD:275368 7/19 (37%)
C2H2 Zn finger 456..476 CDD:275368 3/19 (16%)
C2H2 Zn finger 486..506 CDD:275368
HARE-HTH <566..625 CDD:294801
Kr-h1NP_477466.1 C2H2 Zn finger 196..216 CDD:275368 2/19 (11%)
COG5048 <270..420 CDD:227381 51/149 (34%)
zf-C2H2 271..293 CDD:278523 5/21 (24%)
C2H2 Zn finger 273..293 CDD:275368 5/19 (26%)
zf-H2C2_2 286..309 CDD:290200 9/22 (41%)
C2H2 Zn finger 301..321 CDD:275368 7/19 (37%)
zf-H2C2_2 313..338 CDD:290200 12/24 (50%)
C2H2 Zn finger 329..349 CDD:275368 9/19 (47%)
zf-H2C2_2 344..366 CDD:290200 10/21 (48%)
C2H2 Zn finger 357..377 CDD:275368 6/19 (32%)
zf-H2C2_2 370..396 CDD:290200 7/25 (28%)
C2H2 Zn finger 385..407 CDD:275368 6/21 (29%)
zf-H2C2_2 400..424 CDD:290200 8/23 (35%)
C2H2 Zn finger 415..435 CDD:275368 7/19 (37%)
zf-C2H2 441..463 CDD:278523 4/21 (19%)
C2H2 Zn finger 443..463 CDD:275368 3/19 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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