DRSC/TRiP Functional Genomics Resources

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Protein Alignment pita and CG8944

DIOPT Version :10

Sequence 1:NP_611806.3 Gene:pita / 37730 FlyBaseID:FBgn0034878 Length:683 Species:Drosophila melanogaster
Sequence 2:NP_573065.1 Gene:CG8944 / 32517 FlyBaseID:FBgn0030680 Length:762 Species:Drosophila melanogaster


Alignment Length:335 Identity:74/335 - (22%)
Similarity:116/335 - (34%) Gaps:100/335 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   262 LDSDLPLDDQDDPTKNAEKVATDVFPCPDCERSFPLQQLLEIHRLNHTRS--RSFQCLLCEKSFF 324
            :|.|:|                 .|.|..|.......:.|::|.|.|..|  ..:.|.:|...|.
  Fly   467 MDDDIP-----------------PFKCAHCPEIVQTLRELDLHMLTHQPSLGGGYYCNICSIQFH 514

  Fly   325 SKYDLAKHNFVHTG---ERPFKCAICSKAFTRKALLHRHERTHTD---VPKF------------- 370
            :..:...|..:|.|   |..|.|.:|:.:|..||....|.|.|.:   :|..             
  Fly   515 NAQEFDNHKQLHLGGVTEIKFNCELCTASFREKANYDEHLRRHNEELFLPSLALNHSIMEGGLGD 579

  Fly   371 --ICVYCEKPFLSRQEMEKHAERHQKKRPFQCGVCTKSFAFKQGLERHETV----------HSTN 423
              |.|..|:   ||....:...||..|            |....::..:.:          ..|:
  Fly   580 DEIGVEGEE---SRGSGSRRKRRHAAK------------ATDDMVDDDDRIGGGGGGGSGGGGTD 629

  Fly   424 L--PFPCQHCERSFSTASKLARHLVAHAG--KRAYPCKY--CHKSYMLSHHLSRHLRTHTQTSDA 482
            :  |:.|..|.|||:|...|..|.:.|..  :|.|.|.|  |:||::..:.|..||:.|      
  Fly   630 IAKPYGCDVCRRSFATPGHLNAHRIVHQDERERCYKCDYPQCNKSFVARNSLFEHLKQH------ 688

  Fly   483 SFVCSECKVSYSNYNDLLDHALIHATASLKCPMCRKQIEDIDSVESHMDQHKQSERHACEFCDHI 547
                      |||             ...||.:|.|..:...::::|...|.:.:|:.|:.|...
  Fly   689 ----------YSN-------------EEFKCDICGKTFKSTKNLQNHKQIHDKIKRYVCQICGSA 730

  Fly   548 FLTQKCLQRH 557
            |.....|..|
  Fly   731 FAQAAGLYLH 740

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pitaNP_611806.3 zf-AD 17..92 CDD:214871
COG5048 <281..506 CDD:227381 59/263 (22%)
C2H2 Zn finger 288..308 CDD:275368 5/19 (26%)
C2H2 Zn finger 316..336 CDD:275368 4/19 (21%)
C2H2 Zn finger 344..364 CDD:275368 7/19 (37%)
C2H2 Zn finger 372..388 CDD:275370 4/15 (27%)
C2H2 Zn finger 400..420 CDD:275368 1/29 (3%)
C2H2 Zn finger 428..448 CDD:275368 8/19 (42%)
C2H2 Zn finger 456..476 CDD:275368 8/21 (38%)
C2H2 Zn finger 486..506 CDD:275368 3/19 (16%)
CG8944NP_573065.1 MADF_DNA_bdg 259..344 CDD:463144
MADF 379..472 CDD:214738 2/4 (50%)
C2H2 Zn finger 476..496 CDD:275368 5/19 (26%)
C2H2 Zn finger 506..526 CDD:275368 4/19 (21%)
C2H2 Zn finger 537..557 CDD:275368 7/19 (37%)
C2H2 Zn finger 636..656 CDD:275368 8/19 (42%)
COG5048 <666..734 CDD:227381 22/96 (23%)
C2H2 Zn finger 666..688 CDD:275368 8/21 (38%)
C2H2 Zn finger 696..716 CDD:275368 4/19 (21%)
C2H2 Zn finger 724..744 CDD:275368 5/17 (29%)
Blue background indicates that the domain is not in the aligned region.

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