DRSC/TRiP Functional Genomics Resources

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Protein Alignment pita and CG18262

DIOPT Version :10

Sequence 1:NP_611806.3 Gene:pita / 37730 FlyBaseID:FBgn0034878 Length:683 Species:Drosophila melanogaster
Sequence 2:NP_572453.1 Gene:CG18262 / 31745 FlyBaseID:FBgn0030012 Length:469 Species:Drosophila melanogaster


Alignment Length:364 Identity:86/364 - (23%)
Similarity:148/364 - (40%) Gaps:95/364 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 LKVDNNQELSMDDVQSMLEDMASELEKEFPDIP--------QKASPVKPKVLNKSSIRILNKGPA 235
            ::|..|:||.    :.:.::.:.:||:|..:..        |:|:.:|..:              
  Fly    77 VEVQGNEELH----EELAKEASPDLEEEEEEKEEGSKRQHYQRAAAMKNTL-------------- 123

  Fly   236 APVEPRLATPKVKRDDSG------NVAIVTEVLDSDLPLDDQDDPTKNAEKVATDVFPCPDCERS 294
              ||.|.....::.|.:|      |.....|..:||      ||.||::......:|.|..|:|:
  Fly   124 --VETREDLLDIELDWTGGEQSEHNETHEEEEGESD------DDDTKDSNDTKDMLFQCDQCDRA 180

  Fly   295 FPLQQLLEIH-RLNHTRS---------------------RSFQC--LLCEKSFFSKYDLAKHNFV 335
            :..::.|:.| ||.|:.:                     :.::|  ..|.::|.::.||..|.:.
  Fly   181 YNTKRSLQSHRRLKHSEANGGSLDKSASERNSKKRKGPPKVYKCNEEACNQTFRTERDLRGHRWK 245

  Fly   336 HTGERPFKCAICSKAFTRKALLHRHERTHTDVPKFICVYCEKPFLSRQEMEKHA----------- 389
            |||   ..|.||.|.||:...:.||.:.|:.:....|..|:..|.:::|:..|:           
  Fly   246 HTG---IFCDICGKPFTQSGNMMRHRQRHSGIKPHKCPECDATFYTQKELSSHSICHTGRMPCIC 307

  Fly   390 -----------------ERHQKKRPFQCGVCTKSFAFKQGLERHETVHSTNLPFPCQHCERSFST 437
                             .||..:||.:|.||.|:|.....|..|...|:...||.|..|..:|..
  Fly   308 EVCGRPCRDRGVLTAHMRRHTGERPAKCEVCGKAFYSFHDLNVHAVSHTNLRPFVCDVCGSTFQR 372

  Fly   438 ASKLARHLVAHAGKRAYPCKYCHKSYMLSHHLSRHLRTH 476
            ...|..|.:.|:.:|.|.||.|.|::..|..|:.|:|:|
  Fly   373 KKALRVHKLLHSEQRKYACKLCGKTFAQSGGLNAHMRSH 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pitaNP_611806.3 zf-AD 17..92 CDD:214871
COG5048 <281..506 CDD:227381 63/248 (25%)
C2H2 Zn finger 288..308 CDD:275368 7/20 (35%)
C2H2 Zn finger 316..336 CDD:275368 6/21 (29%)
C2H2 Zn finger 344..364 CDD:275368 8/19 (42%)
C2H2 Zn finger 372..388 CDD:275370 4/15 (27%)
C2H2 Zn finger 400..420 CDD:275368 7/19 (37%)
C2H2 Zn finger 428..448 CDD:275368 5/19 (26%)
C2H2 Zn finger 456..476 CDD:275368 8/19 (42%)
C2H2 Zn finger 486..506 CDD:275368
CG18262NP_572453.1 COG5236 <222..>313 CDD:227561 23/93 (25%)
C2H2 Zn finger 224..246 CDD:275368 6/21 (29%)
C2H2 Zn finger 251..271 CDD:275368 8/19 (42%)
zf-H2C2_2 263..288 CDD:463886 6/24 (25%)
C2H2 Zn finger 279..327 CDD:275368 5/47 (11%)
zf-H2C2_2 320..342 CDD:463886 8/21 (38%)
C2H2 Zn finger 335..355 CDD:275368 7/19 (37%)
C2H2 Zn finger 363..383 CDD:275368 5/19 (26%)
zf-C2H2 389..411 CDD:395048 9/21 (43%)
C2H2 Zn finger 391..411 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.

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