DRSC/TRiP Functional Genomics Resources

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Protein Alignment pita and CG2129

DIOPT Version :9

Sequence 1:NP_611806.3 Gene:pita / 37730 FlyBaseID:FBgn0034878 Length:683 Species:Drosophila melanogaster
Sequence 2:NP_572449.1 Gene:CG2129 / 31741 FlyBaseID:FBgn0030008 Length:465 Species:Drosophila melanogaster


Alignment Length:340 Identity:86/340 - (25%)
Similarity:129/340 - (37%) Gaps:72/340 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 LKVDNNQELSMDDVQSMLEDMASE-----------------------LEKEF---------PDI- 210
            ||||..:|.|..:...|..|:.||                       ||:..         ||: 
  Fly   149 LKVDYKEEDSEQEECGMELDLDSEGRHSAKIPHSCPHCTKVYQSRKVLERHIMRQHKDTLSPDVD 213

  Fly   211 -------PQKASPVKPKVLNKSSIRILNKGPAAPVEPRLATPKVKRDDSGNVAIVTEVLDSDLPL 268
                   |.|.:|||.                       |..:.|.:..|.:......|...|..
  Fly   214 SEDADYEPPKDAPVKS-----------------------AAQEYKCEHCGKIYHGKYSLRQHLKR 255

  Fly   269 DDQDDPTKNAEKVATDVFPCPDCERSFPLQQLLEIHRLNHTRSRSFQCLLCEKSFFSKYDLAKHN 333
            |..     |.|:..:.:|.|.:||...|..:||:.|.:......:  |::|.:.:.::::|.:|.
  Fly   256 DHD-----NGEEGGSAIFTCLECEAQLPRLRLLDEHMVQAHGGAA--CVVCGRRYKTRHELKRHQ 313

  Fly   334 FVHTGERPFKCAI--CSKAFTRKALLHRHERTHTDVPKFICVYCEKPFLSRQEMEKHAERHQKKR 396
            ..||.||...|..  |.|.|.....:..|.:.||:...|:|..|.....:::.:..|...|..:|
  Fly   314 LKHTSERNVPCPHPGCGKRFFTIRHMRNHGKVHTEQKNFVCESCGYSCRNKETLRVHIRSHTGER 378

  Fly   397 PFQCGVCTKSFAFKQGLERHETVHSTNLPFPCQHCERSFSTASKLARHLVAHAGKRAYPCKYCHK 461
            ||.|.||.|.|....||..|..:|||..|..|..|..:||....|..|...||..:.:.||.|..
  Fly   379 PFGCQVCDKRFPSHSGLREHMAMHSTERPHVCSVCGATFSRQKGLYHHKFLHADTKQFVCKLCGN 443

  Fly   462 SYMLSHHLSRHLRTH 476
            :|..:..|:.|:|.|
  Fly   444 AYAQAAGLAGHMRKH 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pitaNP_611806.3 zf-AD 17..92 CDD:214871
COG5048 <281..506 CDD:227381 59/198 (30%)
C2H2 Zn finger 288..308 CDD:275368 7/19 (37%)
C2H2 Zn finger 316..336 CDD:275368 4/19 (21%)
zf-H2C2_2 328..353 CDD:290200 10/26 (38%)
C2H2 Zn finger 344..364 CDD:275368 5/21 (24%)
C2H2 Zn finger 372..388 CDD:275370 2/15 (13%)
C2H2 Zn finger 400..420 CDD:275368 8/19 (42%)
C2H2 Zn finger 428..448 CDD:275368 6/19 (32%)
C2H2 Zn finger 456..476 CDD:275368 7/19 (37%)
C2H2 Zn finger 486..506 CDD:275368
HARE-HTH <566..625 CDD:294801
CG2129NP_572449.1 C2H2 Zn finger 296..316 CDD:275370 4/19 (21%)
zf-C2H2_8 323..411 CDD:292531 27/87 (31%)
C2H2 Zn finger 327..346 CDD:275368 4/18 (22%)
C2H2 Zn finger 354..374 CDD:275368 3/19 (16%)
zf-H2C2_2 367..389 CDD:290200 9/21 (43%)
C2H2 Zn finger 382..402 CDD:275368 8/19 (42%)
zf-H2C2_2 395..419 CDD:290200 9/23 (39%)
C2H2 Zn finger 410..430 CDD:275368 6/19 (32%)
C2H2 Zn finger 438..458 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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