DRSC/TRiP Functional Genomics Resources

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Protein Alignment pita and CG2129

DIOPT Version :10

Sequence 1:NP_611806.3 Gene:pita / 37730 FlyBaseID:FBgn0034878 Length:683 Species:Drosophila melanogaster
Sequence 2:NP_572449.1 Gene:CG2129 / 31741 FlyBaseID:FBgn0030008 Length:465 Species:Drosophila melanogaster


Alignment Length:340 Identity:86/340 - (25%)
Similarity:129/340 - (37%) Gaps:72/340 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 LKVDNNQELSMDDVQSMLEDMASE-----------------------LEKEF---------PDI- 210
            ||||..:|.|..:...|..|:.||                       ||:..         ||: 
  Fly   149 LKVDYKEEDSEQEECGMELDLDSEGRHSAKIPHSCPHCTKVYQSRKVLERHIMRQHKDTLSPDVD 213

  Fly   211 -------PQKASPVKPKVLNKSSIRILNKGPAAPVEPRLATPKVKRDDSGNVAIVTEVLDSDLPL 268
                   |.|.:|||.                       |..:.|.:..|.:......|...|..
  Fly   214 SEDADYEPPKDAPVKS-----------------------AAQEYKCEHCGKIYHGKYSLRQHLKR 255

  Fly   269 DDQDDPTKNAEKVATDVFPCPDCERSFPLQQLLEIHRLNHTRSRSFQCLLCEKSFFSKYDLAKHN 333
            |..     |.|:..:.:|.|.:||...|..:||:.|.:......:  |::|.:.:.::::|.:|.
  Fly   256 DHD-----NGEEGGSAIFTCLECEAQLPRLRLLDEHMVQAHGGAA--CVVCGRRYKTRHELKRHQ 313

  Fly   334 FVHTGERPFKCAI--CSKAFTRKALLHRHERTHTDVPKFICVYCEKPFLSRQEMEKHAERHQKKR 396
            ..||.||...|..  |.|.|.....:..|.:.||:...|:|..|.....:::.:..|...|..:|
  Fly   314 LKHTSERNVPCPHPGCGKRFFTIRHMRNHGKVHTEQKNFVCESCGYSCRNKETLRVHIRSHTGER 378

  Fly   397 PFQCGVCTKSFAFKQGLERHETVHSTNLPFPCQHCERSFSTASKLARHLVAHAGKRAYPCKYCHK 461
            ||.|.||.|.|....||..|..:|||..|..|..|..:||....|..|...||..:.:.||.|..
  Fly   379 PFGCQVCDKRFPSHSGLREHMAMHSTERPHVCSVCGATFSRQKGLYHHKFLHADTKQFVCKLCGN 443

  Fly   462 SYMLSHHLSRHLRTH 476
            :|..:..|:.|:|.|
  Fly   444 AYAQAAGLAGHMRKH 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pitaNP_611806.3 zf-AD 17..92 CDD:214871
COG5048 <281..506 CDD:227381 59/198 (30%)
C2H2 Zn finger 288..308 CDD:275368 7/19 (37%)
C2H2 Zn finger 316..336 CDD:275368 4/19 (21%)
C2H2 Zn finger 344..364 CDD:275368 5/21 (24%)
C2H2 Zn finger 372..388 CDD:275370 2/15 (13%)
C2H2 Zn finger 400..420 CDD:275368 8/19 (42%)
C2H2 Zn finger 428..448 CDD:275368 6/19 (32%)
C2H2 Zn finger 456..476 CDD:275368 7/19 (37%)
C2H2 Zn finger 486..506 CDD:275368
CG2129NP_572449.1 SFP1 <180..258 CDD:227516 15/100 (15%)
C2H2 Zn finger 296..316 CDD:275370 4/19 (21%)
zf-C2H2_8 323..411 CDD:464935 27/87 (31%)
C2H2 Zn finger 327..346 CDD:275368 4/18 (22%)
C2H2 Zn finger 354..374 CDD:275368 3/19 (16%)
SFP1 <376..461 CDD:227516 31/83 (37%)
C2H2 Zn finger 382..402 CDD:275368 8/19 (42%)
C2H2 Zn finger 410..430 CDD:275368 6/19 (32%)
C2H2 Zn finger 438..458 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.

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