DRSC/TRiP Functional Genomics Resources

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Protein Alignment pita and CG2120

DIOPT Version :9

Sequence 1:NP_611806.3 Gene:pita / 37730 FlyBaseID:FBgn0034878 Length:683 Species:Drosophila melanogaster
Sequence 2:NP_572446.2 Gene:CG2120 / 31737 FlyBaseID:FBgn0030005 Length:315 Species:Drosophila melanogaster


Alignment Length:341 Identity:88/341 - (25%)
Similarity:130/341 - (38%) Gaps:66/341 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 PVPRRSHAYELKVD-NNQELSMDDVQ--SMLEDMASELEKEFPDIPQKASPVKPKVLNKSSIRIL 230
            ||.:.::|.....| .|.::.::|:|  :.|||::                              
  Fly     6 PVSQMANATLADDDLGNYDVCLEDLQLFAQLEDLS------------------------------ 40

  Fly   231 NKGPAAPVEPRLATPKVKRD--DSGNVAI----VTEVLDSDLPLDDQDDPTKNAEKVATDVFPCP 289
              |...|:|..|..|..:.|  :..|.|:    .||...:|:....:...||.......| ..|.
  Fly    41 --GERLPMEMELLNPGSEYDLLELVNGALQQRNTTEHKPTDMCKPKRTPTTKRHRTTGKD-HTCD 102

  Fly   290 DCERSFPLQQLLEIHRLNHTRSRSFQCLLCEKSFFSKYDLAKHNFVHTGERPFKCAICSKAFTRK 354
            .|:|.|.....|.||::.||..:...|:.|.|.|.....|..|...||.|||.||.||.|.|...
  Fly   103 ICDRRFSEAYNLRIHKMTHTDEKPHVCVECGKGFRQLNKLRIHAVTHTAERPHKCDICGKGFRYA 167

  Fly   355 ALLHRHERTHTDVPKFICVY--CEKPFLSRQEMEKHAE-RH--------------QKKR-----P 397
            ..|..|.|.||....:.|:.  |...|.|......|.: ||              |::|     .
  Fly   168 NYLTVHRRLHTGEKPYPCLATDCHLSFHSIHARRIHTKLRHAAQTDPDPEHPLAEQEQRDTSALS 232

  Fly   398 FQCGVCTKSFAFKQGLERHETVHSTNLPFPC--QHCERSFSTASKLARHLVAHAGKRAYPCKYCH 460
            |.|.||::....:..|..|...|.....|||  ..|.:.|.:||:|..|.:||..:|.:.|..|.
  Fly   233 FTCPVCSRVLTDQCYLSIHLKRHYNQRDFPCPQPECGKRFFSASELKHHQIAHTQQRPFACPLCP 297

  Fly   461 KSYMLSHHLSRHLRTH 476
            ..::...:..:||:.|
  Fly   298 ARFLRKSNHKQHLKVH 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pitaNP_611806.3 zf-AD 17..92 CDD:214871
COG5048 <281..506 CDD:227381 65/220 (30%)
C2H2 Zn finger 288..308 CDD:275368 7/19 (37%)
C2H2 Zn finger 316..336 CDD:275368 6/19 (32%)
zf-H2C2_2 328..353 CDD:290200 13/24 (54%)
C2H2 Zn finger 344..364 CDD:275368 8/19 (42%)
C2H2 Zn finger 372..388 CDD:275370 4/17 (24%)
C2H2 Zn finger 400..420 CDD:275368 5/19 (26%)
C2H2 Zn finger 428..448 CDD:275368 7/21 (33%)
C2H2 Zn finger 456..476 CDD:275368 4/19 (21%)
C2H2 Zn finger 486..506 CDD:275368
HARE-HTH <566..625 CDD:294801
CG2120NP_572446.2 C2H2 Zn finger 101..121 CDD:275368 7/19 (37%)
zf-H2C2_2 113..138 CDD:290200 9/24 (38%)
C2H2 Zn finger 129..149 CDD:275368 6/19 (32%)
zf-H2C2_2 142..166 CDD:290200 13/23 (57%)
COG5048 151..>264 CDD:227381 32/112 (29%)
C2H2 Zn finger 157..177 CDD:275368 8/19 (42%)
C2H2 Zn finger 185..206 CDD:275368 5/20 (25%)
C2H2 Zn finger 235..255 CDD:275368 5/19 (26%)
C2H2 Zn finger 263..285 CDD:275368 7/21 (33%)
C2H2 Zn finger 293..313 CDD:275368 4/19 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446555
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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