DRSC/TRiP Functional Genomics Resources

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Protein Alignment pita and CG2116

DIOPT Version :9

Sequence 1:NP_611806.3 Gene:pita / 37730 FlyBaseID:FBgn0034878 Length:683 Species:Drosophila melanogaster
Sequence 2:NP_572444.2 Gene:CG2116 / 31735 FlyBaseID:FBgn0030003 Length:598 Species:Drosophila melanogaster


Alignment Length:633 Identity:145/633 - (22%)
Similarity:250/633 - (39%) Gaps:137/633 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 VVPAKTAEPSETPK---KLLNTMAKSS------------SQVIIEDVQVLESAMVTPRT----VA 165
            |:||.:....|..:   :::||...::            ..:||.:...:|..|:..:.    :.
  Fly    15 VLPANSDYSDEDNRGNVRVINTSDDATYVLLDNLGNEFEEDIIIVNENGVEKEMLMSKELRDFIV 79

  Fly   166 GSSPVPRRSHAYELKVDNN------QELSMDDVQSMLEDMASELEKE-----FPDIPQKASPVKP 219
            |       |...:|..|..      :||.|.:|..::| :..|:|:|     :.|...:.|...|
  Fly    80 G-------SRVKDLTDDEQMPQFVVRELDMSEVGDLVE-VEPEMEQEADYGDYGDYEHEPSYGHP 136

  Fly   220 KVLNKSSIRILNKGPAA-----PVEPRLATPKVK-----RDDSGNVAIVTEVLDSDLPLDDQDDP 274
            :. |:.....|:..|.:     |..||..:|.|:     |:.:..:|:.:.|  |....||.|..
  Fly   137 RD-NERVEEDLDMYPPSSPSLPPSPPRPPSPVVQPASKARNSARQIALRSFV--SQKNNDDDDGS 198

  Fly   275 TKNAEKVATDVFPCPDCERSFPLQQLLEIHRLNHTRSRSFQCLLCEKSFFSK-----YDLAKHNF 334
            .|..:                |.:::||..: ...|...|..|:.....|.:     .:.:..:.
  Fly   199 VKEVK----------------PSEKMLEEFK-GPRRYMLFDDLIATIVDFDEDSTPLVEFSMISD 246

  Fly   335 VHTGERPFKCAICSKAFTRKALLHRHERTHTDVP---KFICVYCEKPFLSRQEMEKHAERHQKKR 396
            :...:.|.:|.||.... .|:.|.:|.:||. ||   ::.|:||.:.:...:.:..||.||...|
  Fly   247 IMDEKLPVECGICPDVM-HKSKLSKHHKTHL-VPGTNRYACIYCTETYRDCKYLAGHARRHMGIR 309

  Fly   397 PFQCGVCTKSFAFKQGLERHETVHSTNLPFPCQHCERSFSTASKLARHLVA-HAGKRAYPCKYCH 460
            |:.|.:||..|:.||.|..|...........|:.|.::|:..::|.||..| |..||.:.|:||.
  Fly   310 PYVCELCTLYFSTKQDLRVHNQRRHLEKEHICEVCGKTFAQNTQLKRHREATHEKKRRFQCEYCQ 374

  Fly   461 KSYMLSHHLSRHLRTHTQTSDASFVCSECKVSYSNYNDLLDHAL-IH-ATASLKCPMCRKQIEDI 523
            |:|..:..|..|:|...........|..|.:...:.:.:..|.. :| :..:..|.:|:::..||
  Fly   375 KAYYKNFSLQEHIRNVHMGKRRMLKCPFCGMQCRDAHKMARHRKEMHLSQGTYVCHLCQEEFTDI 439

  Fly   524 DSVESHMDQHKQSERHACEFCDHIFL----------TQKCLQRHI--EDDHVVEMEPYQNEF-ED 575
                |:.|.||:|.:  |......|:          ::....|::  :||....|.|.|.|: ||
  Fly   440 ----SYFDAHKRSIQ--CRSNTRRFVNADGNREGSDSESISGRNMNGQDDDYDGMGPLQEEYDED 498

  Fly   576 DG--------EGEGG------VDEKEE---HLDDFEDMDNVKQEEFVTEYLEDDALYEDHLDDSD 623
            ||        |.:|.      :||.|:   .|.|::|      :..:.|...|   .||..:|.|
  Fly   499 DGLLVEDNQPEEQGSPSNRQYLDESEQQYVQLSDYDD------QHLLVENAVD---AEDGGEDLD 554

  Fly   624 ESFTPPPPKQRKTNPPKDAQQSVRQTRSRDAQ-------RITQKTGKN 664
            |..|    :.:..|..:...|..:|...|...       .||.||..|
  Fly   555 ELLT----EDQYFNAVQQHHQQHQQHHGRGQDYNDELIYEITLKTEDN 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pitaNP_611806.3 zf-AD 17..92 CDD:214871
COG5048 <281..506 CDD:227381 56/234 (24%)
C2H2 Zn finger 288..308 CDD:275368 3/19 (16%)
C2H2 Zn finger 316..336 CDD:275368 2/24 (8%)
zf-H2C2_2 328..353 CDD:290200 4/24 (17%)
C2H2 Zn finger 344..364 CDD:275368 6/19 (32%)
C2H2 Zn finger 372..388 CDD:275370 3/15 (20%)
C2H2 Zn finger 400..420 CDD:275368 8/19 (42%)
C2H2 Zn finger 428..448 CDD:275368 7/20 (35%)
C2H2 Zn finger 456..476 CDD:275368 8/19 (42%)
C2H2 Zn finger 486..506 CDD:275368 3/20 (15%)
HARE-HTH <566..625 CDD:294801 22/76 (29%)
CG2116NP_572444.2 C2H2 Zn finger 256..275 CDD:275368 6/19 (32%)
C2H2 Zn finger 285..305 CDD:275368 5/19 (26%)
PHA00733 <308..357 CDD:177301 14/48 (29%)
C2H2 Zn finger 313..334 CDD:275368 8/20 (40%)
C2H2 Zn finger 341..362 CDD:275368 7/20 (35%)
C2H2 Zn finger 370..388 CDD:275368 7/17 (41%)
C2H2 Zn finger 400..418 CDD:275370 3/17 (18%)
C2H2 Zn finger 429..447 CDD:275368 7/21 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449768
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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