DRSC/TRiP Functional Genomics Resources

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Protein Alignment pita and mnm-2

DIOPT Version :10

Sequence 1:NP_611806.3 Gene:pita / 37730 FlyBaseID:FBgn0034878 Length:683 Species:Drosophila melanogaster
Sequence 2:NP_509256.2 Gene:mnm-2 / 182489 WormBaseID:WBGene00003380 Length:249 Species:Caenorhabditis elegans


Alignment Length:265 Identity:66/265 - (24%)
Similarity:107/265 - (40%) Gaps:48/265 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 ILNKGPAAPVEPRLATPKVKRDDSGNVAIVTEVLDSDLPLDDQDDPTKNAEKVATDV-FPCPDCE 292
            :|||.|...:|..      :.|:..:   ..|.|.|.....:.|..|::|...|:.| .|.||..
 Worm    15 LLNKKPKEELETE------EEDEEED---EEEELSSSEVTSENDMETESASSSASSVGQPKPDFS 70

  Fly   293 RSFPLQQLLEIHRLNHT-RSRSFQCLLCEKSFFSKYDLAKH--------------NFVHTGERPF 342
            ....:...|:..:|... |:...|.:|.....|...:|:||              |..||...||
 Worm    71 AFHKIFSNLDFAKLAAVKRNGHHQPMLFRPECFFPLELSKHLHLVQQTFQMNVLQNLGHTLPLPF 135

  Fly   343 KCAICSKAFTRKALLHRHERTHTDVPKFICVYCEKPFLSRQEMEKHAERHQKKRPFQCGVCTKSF 407
            ...:.:.|..:|.|.::                      |.....|:::...|: ::|.||.|:|
 Worm   136 VPMLKNVAPAQKRLNNK----------------------RASYVDHSQKGNLKK-YRCDVCDKTF 177

  Fly   408 AFKQGLERHETVHSTNLPFPCQHCERSFSTASKLARHLVAHAGKRAYPCKYCHKSYMLSHHLSRH 472
            :....|..|:.:|:...||.|:||.|:|.....|.||.:.|...:.|.|..|.|::..:.:|..|
 Worm   178 SRSNTLITHKRIHTGEKPFKCEHCGRAFRQPGNLTRHRLTHTTVKPYVCGLCDKAFNRASNLHTH 242

  Fly   473 LRTHT 477
            :||||
 Worm   243 MRTHT 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pitaNP_611806.3 zf-AD 17..92 CDD:214871
COG5048 <281..506 CDD:227381 54/213 (25%)
C2H2 Zn finger 288..308 CDD:275368 4/19 (21%)
C2H2 Zn finger 316..336 CDD:275368 6/33 (18%)
C2H2 Zn finger 344..364 CDD:275368 3/19 (16%)
C2H2 Zn finger 372..388 CDD:275370 1/15 (7%)
C2H2 Zn finger 400..420 CDD:275368 7/19 (37%)
C2H2 Zn finger 428..448 CDD:275368 8/19 (42%)
C2H2 Zn finger 456..476 CDD:275368 6/19 (32%)
C2H2 Zn finger 486..506 CDD:275368
mnm-2NP_509256.2 COG5048 <73..>226 CDD:227381 40/175 (23%)
SFP1 <166..247 CDD:227516 28/81 (35%)
C2H2 Zn finger 170..190 CDD:275368 7/19 (37%)
zf-H2C2_2 183..207 CDD:463886 10/23 (43%)
C2H2 Zn finger 198..218 CDD:275368 8/19 (42%)
C2H2 Zn finger 226..246 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.

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