DRSC/TRiP Functional Genomics Resources

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Protein Alignment pita and LOC116406487

DIOPT Version :10

Sequence 1:NP_611806.3 Gene:pita / 37730 FlyBaseID:FBgn0034878 Length:683 Species:Drosophila melanogaster
Sequence 2:XP_031760245.1 Gene:LOC116406487 / 116406487 XenbaseID:XB-GENE-29091511 Length:380 Species:Xenopus tropicalis


Alignment Length:425 Identity:105/425 - (24%)
Similarity:158/425 - (37%) Gaps:92/425 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 NWPSPLEKPRAPMTMVASKKLLVVPAKTAEPSETPKKLLNTMAKSSSQVIIEDVQVLESAMVTPR 162
            ||.|..|.|..|.:..:...:||..:.|||||.     ||......:..:.:|.|          
 Frog    12 NWLSEQEGPLTPGSTRSFPAILVGLSNTAEPSP-----LNGTECGETSSLTKDCQ---------- 61

  Fly   163 TVAGSSPVPRRSHAYELKVDNNQELSMDDVQSMLEDMASELEKEFPDIPQKASPVKPKVL----- 222
                                                            .|:.|..:.|:.     
 Frog    62 ------------------------------------------------GQRRSSTEEKLFVCAEC 78

  Fly   223 NKSSIRILNKGPAAPVEPRLATPKVKRDDSGNVAIVTEVLDSDLPLDDQDDPTKNAEKVATDVFP 287
            .|:|.:..|.|     |..:...:.|...|..::.:|..:            ....|:..|    
 Frog    79 GKTSPQNANTG-----ERNITCAQCKETQSFRISRLTHFV------------IHTGEETIT---- 122

  Fly   288 CPDCERSFPLQQLLEIHRLNHTRSRSFQCLLCEKSFFSKYDLAKHNFVHTGERPFKCAICSKAFT 352
            |.:..:.|..:..|..|...||..:.|.|..|.|.|..|..|..|..:||||:||.|..|.|.|.
 Frog   123 CTESGKGFAQKNYLVSHMKIHTGEKPFTCTECGKGFAQKNYLVSHMKIHTGEKPFTCTECGKCFA 187

  Fly   353 RKALLHRHERTHTDVPKFICVYCEKPFLSRQEMEKHAERHQKKRPFQCGVCTKSFAFKQGLERHE 417
            .|..|..|.:.||....|.|..|.|.|..:.::..|.:.|..::||.|..|.|.|..|..|..|.
 Frog   188 HKNNLVCHLKIHTGEKPFTCSECGKGFAQKNDLVSHMKIHTGEKPFTCTECGKGFIQKNHLVAHM 252

  Fly   418 TVHSTNLPFPCQHCERSFSTASKLARHLVAHAGKRAYPCKYCHKSYMLSHHLSRHLRTHTQTSDA 482
            .:|:...||.|..|.:.|:..:.|..|:..|.|::.:.|..|.|.:...:||..|::.|  |.:.
 Frog   253 KIHTGEKPFTCTECGKGFTQKNHLVAHMKIHTGEKPFTCTECGKGFTQKNHLVAHMKIH--TGEK 315

  Fly   483 SFVCSECKVSYSNYNDLLDHALIHATASL-KCPMC 516
            .|.|:||...:::.|:|:.|..||...:| .|..|
 Frog   316 PFTCTECGKGFAHKNNLIGHLKIHTGENLFTCTEC 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pitaNP_611806.3 zf-AD 17..92 CDD:214871
COG5048 <281..506 CDD:227381 71/224 (32%)
C2H2 Zn finger 288..308 CDD:275368 4/19 (21%)
C2H2 Zn finger 316..336 CDD:275368 7/19 (37%)
C2H2 Zn finger 344..364 CDD:275368 7/19 (37%)
C2H2 Zn finger 372..388 CDD:275370 4/15 (27%)
C2H2 Zn finger 400..420 CDD:275368 7/19 (37%)
C2H2 Zn finger 428..448 CDD:275368 5/19 (26%)
C2H2 Zn finger 456..476 CDD:275368 6/19 (32%)
C2H2 Zn finger 486..506 CDD:275368 6/19 (32%)
LOC116406487XP_031760245.1 C2H2 Zn finger 95..115 CDD:275368 3/31 (10%)
C2H2 Zn finger 123..143 CDD:275368 4/19 (21%)
zf-H2C2_2 135..160 CDD:463886 9/24 (38%)
C2H2 Zn finger 151..171 CDD:275368 7/19 (37%)
zf-H2C2_2 163..188 CDD:463886 12/24 (50%)
C2H2 Zn finger 179..199 CDD:275368 7/19 (37%)
COG5048 <203..347 CDD:227381 44/145 (30%)
C2H2 Zn finger 207..227 CDD:275368 5/19 (26%)
C2H2 Zn finger 235..255 CDD:275368 7/19 (37%)
C2H2 Zn finger 263..283 CDD:275368 5/19 (26%)
C2H2 Zn finger 291..311 CDD:275368 6/19 (32%)
C2H2 Zn finger 319..339 CDD:275368 6/19 (32%)
C2H2 Zn finger 347..367 CDD:275368 2/4 (50%)
Blue background indicates that the domain is not in the aligned region.

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