DRSC/TRiP Functional Genomics Resources

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Protein Alignment pita and LOC110437786

DIOPT Version :9

Sequence 1:NP_611806.3 Gene:pita / 37730 FlyBaseID:FBgn0034878 Length:683 Species:Drosophila melanogaster
Sequence 2:XP_017211305.1 Gene:LOC110437786 / 110437786 -ID:- Length:578 Species:Danio rerio


Alignment Length:326 Identity:104/326 - (31%)
Similarity:149/326 - (45%) Gaps:42/326 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   265 DLPLDDQDDPTKN-----AEKVATDVFPCPDCERSFPLQQLLEIHRLNHTRSRSFQCLLCEKSFF 324
            ||..|:.....||     |||  |..|||..|.:||..:..|.:|...||..:.:.|.:|.|||.
Zfish    72 DLMTDEPSSVAKNTSCEGAEK--TKHFPCHQCGKSFSRKHGLNLHMRIHTGEKPYSCTVCGKSFS 134

  Fly   325 SKYDLAKHNFVHTGERPFKCAICSKAFTRKALLHRHERTHTDVPKFICVYCEKPFLSRQEMEKHA 389
            :|.....|..:||||:|:.|.:|.|:||.|:..:.|.|.||....|.|..|||.|..::::|.|.
Zfish   135 AKSGFNTHMRIHTGEKPYSCTVCGKSFTEKSRFNIHMRIHTGERPFSCTVCEKSFNEKKKLEIHM 199

  Fly   390 ERHQKKRPFQCGVCTKSFAFKQGLERHETVHSTNLPFPCQH------------------------ 430
            ..|..::|:.|..|.|||:.|..|..|..:|:...||.|||                        
Zfish   200 RIHTGEKPYSCTECGKSFSEKSKLGMHMRIHTGEKPFACQHCGKRFSQMVSLKSHFRVHTGEKPH 264

  Fly   431 ----CERSFSTASKLARHLVAHAGKRAYPCKYCHKSYMLSHHLSRHLRTHTQTSDASFVCSECKV 491
                |.:||:..|.|..|::.|.|::.:||..|.|.|:..|||.||.|.|.:  ...|:|.:|..
Zfish   265 TCQQCGKSFAQKSTLTAHIIRHTGEKPFPCDQCEKRYVCKHHLKRHKRIHAK--HKYFICDQCGS 327

  Fly   492 SYSNYNDLLDHALIHATASLKCPMCRKQIEDIDSVESHMDQHKQSERHACEFCDHIFLTQKCLQR 556
            |:....:...|...||..|..|..|.:.......:||||..|...:.::|..|.     :.|..:
Zfish   328 SFKLKQNFDQHMKNHAEKSFICDQCGRNCISESGLESHMKVHTGEKPYSCTECG-----KSCSHK 387

  Fly   557 H 557
            |
Zfish   388 H 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pitaNP_611806.3 zf-AD 17..92 CDD:214871
COG5048 <281..506 CDD:227381 82/252 (33%)
C2H2 Zn finger 288..308 CDD:275368 6/19 (32%)
C2H2 Zn finger 316..336 CDD:275368 7/19 (37%)
zf-H2C2_2 328..353 CDD:290200 10/24 (42%)
C2H2 Zn finger 344..364 CDD:275368 8/19 (42%)
C2H2 Zn finger 372..388 CDD:275370 6/15 (40%)
C2H2 Zn finger 400..420 CDD:275368 8/19 (42%)
C2H2 Zn finger 428..448 CDD:275368 9/47 (19%)
C2H2 Zn finger 456..476 CDD:275368 10/19 (53%)
C2H2 Zn finger 486..506 CDD:275368 4/19 (21%)
HARE-HTH <566..625 CDD:294801
LOC110437786XP_017211305.1 COG5048 91..511 CDD:227381 98/307 (32%)
C2H2 Zn finger 98..118 CDD:275368 6/19 (32%)
C2H2 Zn finger 126..146 CDD:275368 7/19 (37%)
C2H2 Zn finger 154..174 CDD:275368 8/19 (42%)
C2H2 Zn finger 182..202 CDD:275368 7/19 (37%)
C2H2 Zn finger 210..230 CDD:275368 8/19 (42%)
C2H2 Zn finger 238..258 CDD:275368 3/19 (16%)
C2H2 Zn finger 266..286 CDD:275368 6/19 (32%)
C2H2 Zn finger 294..314 CDD:275368 10/19 (53%)
C2H2 Zn finger 322..342 CDD:275368 4/19 (21%)
C2H2 Zn finger 349..369 CDD:275368 6/19 (32%)
C2H2 Zn finger 377..397 CDD:275368 4/17 (24%)
C2H2 Zn finger 405..425 CDD:275368
C2H2 Zn finger 433..453 CDD:275368
C2H2 Zn finger 461..481 CDD:275368
C2H2 Zn finger 489..509 CDD:275368
C2H2 Zn finger 518..538 CDD:275368
C2H2 Zn finger 544..560 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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