DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pita and si:dkeyp-2e4.6

DIOPT Version :9

Sequence 1:NP_611806.3 Gene:pita / 37730 FlyBaseID:FBgn0034878 Length:683 Species:Drosophila melanogaster
Sequence 2:NP_001124126.1 Gene:si:dkeyp-2e4.6 / 100002333 ZFINID:ZDB-GENE-061009-50 Length:271 Species:Danio rerio


Alignment Length:275 Identity:74/275 - (26%)
Similarity:110/275 - (40%) Gaps:48/275 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 PDIPQKASPVKPKVLNKSSIRILNKGPAAPVEPRLATPKVKRDDSGNVAIVTEVLDSDLPLDDQD 272
            |:.....:.|:..||:|:      :|.||....||.. :||.|::                .||.
Zfish    39 PESKSTNNDVETLVLSKT------EGSAALFCRRLKY-RVKTDET----------------SDQS 80

  Fly   273 DPTKNAEKVATDVFPCPDCERSFPLQQLLEIHRLNHTRSRSFQCLLCEKSFFSKYDLAKHNFVHT 337
            .|.             .|.|...|:.       .:.|..:.|.|.||...|....::.:|..:||
Zfish    81 SPD-------------TDTEDELPIS-------TSPTPGKKFVCKLCGFEFTYNSNMVRHMRIHT 125

  Fly   338 GERPFKCAICSKAFTRKALLHRHERTHTDVPK-----FICVYCEKPFLSRQEMEKHAERHQKKRP 397
            .|.|:.|.||.|.|.|:..|..|...||.|.:     |.|..|.|.|.....::.|..:|:.:||
Zfish   126 EETPYVCEICGKGFKRQDWLKLHISVHTGVKRKRKKTFGCDQCGKKFHGSTALQSHLNKHRGERP 190

  Fly   398 FQCGVCTKSFAFKQGLERHETVHSTNLPFPCQHCERSFSTASKLARHLVAHAGKRAYPCKYCHKS 462
            |.|..|.|||.....|.||.....:.....|..|...|:..:.|.:|:..|.|:|.|.|.:|.|:
Zfish   191 FPCVQCDKSFFSHSDLYRHINDCHSQKKHSCSLCGNGFTRRTSLLKHMRIHTGERPYSCPHCGKT 255

  Fly   463 YMLSHHLSRHLRTHT 477
            :...:....||:.|:
Zfish   256 FPYKYSFEMHLKRHS 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pitaNP_611806.3 zf-AD 17..92 CDD:214871
COG5048 <281..506 CDD:227381 58/202 (29%)
C2H2 Zn finger 288..308 CDD:275368 3/19 (16%)
C2H2 Zn finger 316..336 CDD:275368 5/19 (26%)
zf-H2C2_2 328..353 CDD:290200 10/24 (42%)
C2H2 Zn finger 344..364 CDD:275368 8/19 (42%)
C2H2 Zn finger 372..388 CDD:275370 4/15 (27%)
C2H2 Zn finger 400..420 CDD:275368 8/19 (42%)
C2H2 Zn finger 428..448 CDD:275368 5/19 (26%)
C2H2 Zn finger 456..476 CDD:275368 5/19 (26%)
C2H2 Zn finger 486..506 CDD:275368
HARE-HTH <566..625 CDD:294801
si:dkeyp-2e4.6NP_001124126.1 COG5048 <98..256 CDD:227381 51/157 (32%)
C2H2 Zn finger 104..124 CDD:275368 5/19 (26%)
zf-H2C2_2 116..141 CDD:290200 10/24 (42%)
C2H2 Zn finger 132..152 CDD:275368 8/19 (42%)
C2H2 Zn finger 165..185 CDD:275368 5/19 (26%)
zf-H2C2_2 177..200 CDD:290200 8/22 (36%)
C2H2 Zn finger 193..241 CDD:275368 13/47 (28%)
zf-H2C2_2 233..256 CDD:290200 9/22 (41%)
C2H2 Zn finger 249..269 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.