DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dcp-1 and csp-2

DIOPT Version :9

Sequence 1:NP_476974.1 Gene:Dcp-1 / 37729 FlyBaseID:FBgn0010501 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_001370851.1 Gene:csp-2 / 177391 WormBaseID:WBGene00000820 Length:826 Species:Caenorhabditis elegans


Alignment Length:318 Identity:98/318 - (30%)
Similarity:141/318 - (44%) Gaps:59/318 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 TPESLVVGGATAASPL---------------PANKF-VARMPVE------------RYASEYNMS 74
            ||.....|..|::|.|               |.|.| ..||..|            :|.:  |.|
 Worm   524 TPSPADPGPTTSSSSLTQDPASNATGFSGSSPPNSFEETRMMCEDASDGKKIDETRKYRN--NRS 586

  Fly    75 HKHRGVALIFNHEFFDIPSLKSRTGTNVDAQELKKAFENLGFAVSVHKDCKLRDILKHVGKAAEL 139
            .|.|  |:|.|:..|  ..::.|.|::.|.::|.|.||.||:..:.:.:.|..:||:.|.:..:.
 Worm   587 SKCR--AIIINNVVF--CGMEKRIGSDKDKKKLSKLFERLGYQSTSYDNLKSSEILETVRQFTQS 647

  Fly   140 DHTDNDCLAVAILSHGEHGYLYAKD--TQYKLDNIWHYFTATFCPSLAGKPKLFFIQACQGDRLD 202
            :|  .|.|.:.|:|||:.|.||..|  ....||.|....||    |||.|||......|:|||:|
 Worm   648 NH--GDSLIITIMSHGDQGLLYGVDGVPVQMLDIIDLMCTA----SLAKKPKWLMCVCCRGDRID 706

  Fly   203 GGITLEKGVTETDGESSTSY------KIPIH------ADFLFSYSTIPGYFSWRNINNGSWYMQS 255
            ..:..: |..:...:....:      |.|.|      ||.|.|:||.||:.|:|:...|:||:|.
 Worm   707 RAVRCD-GFIDNFFDRFPKFFQFMKSKFPSHQTSSSQADLLVSFSTSPGFLSFRDETKGTWYIQE 770

  Fly   256 LIRELNANGKKYDLLTLLTFVNQRVALDFESNVPATPMMDRQKQIPCLTSMLTRILRF 313
            |.|.:..|.|...|..||...|:||...:|    |..::...||.|...|..|:.|.|
 Worm   771 LYRVIIENAKDTHLADLLMETNRRVVEKYE----ADKVVIVCKQAPEFWSRFTKQLFF 824

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dcp-1NP_476974.1 CASc 71..313 CDD:214521 84/255 (33%)
csp-2NP_001370851.1 pneumo_PspA 239..>533 CDD:411490 3/8 (38%)
PHA03418 <475..>563 CDD:177646 9/38 (24%)
CASc 581..824 CDD:237997 85/259 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162599
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3573
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48030
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000242
OrthoInspector 1 1.000 - - mtm4766
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.750

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