DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dcp-1 and Casp6

DIOPT Version :10

Sequence 1:NP_476974.1 Gene:Dcp-1 / 37729 FlyBaseID:FBgn0010501 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_033941.3 Gene:Casp6 / 12368 MGIID:1312921 Length:276 Species:Mus musculus


Alignment Length:272 Identity:105/272 - (38%)
Similarity:141/272 - (51%) Gaps:34/272 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 ASEYNMSHKHRGVALIFNHE-FFDIPSLKSRTGTNVDAQELKKAFENLGFAVSVHKDCKLRDILK 131
            |.:|.|.||.|||||||||| ||...:|..|.|||.|...|.:.|.:|||.|....|.:..::|.
Mouse    17 AEQYKMDHKRRGVALIFNHERFFWHLTLPERRGTNADRDNLTRRFSDLGFEVKCFNDLRAEELLL 81

  Fly   132 HVGKAAELDHTDNDCLAVAILSHGEHGYLYAKDTQYKLDNIWHYFTATFCPSLAGKPKLFFIQAC 196
            .:.:.:...|.|.||.....|||||..::||.|.:.::..:...|....|.||.||||:|.||||
Mouse    82 KIHEVSTSSHIDADCFICVFLSHGEGNHVYAYDAKIEIQTLTGLFKGDKCQSLVGKPKIFIIQAC 146

  Fly   197 QG-----------------DRLDGGITLEKGVTETDGESSTSYKIPIHADFLFSYSTIPGYFSWR 244
            :|                 |:||       .||:.|  :::.|.:|..||||..||...||:|.|
Mouse   147 RGSQHDVPVVPLDMVDHQTDKLD-------NVTQVD--AASVYTLPAGADFLMCYSVAEGYYSHR 202

  Fly   245 NINNGSWYMQSLIRELNANGKKYDLLTLLTFVNQRVA---LDFESNVPATPMMDRQKQIPCLTSM 306
            ...|||||:|.|...|...|...:...|||.||::|:   :||..:    |....:||:||..||
Mouse   203 ETVNGSWYIQDLCEMLARYGSSLEFTELLTLVNRKVSQRRVDFCKD----PDAIGKKQVPCFASM 263

  Fly   307 LTRILRFGDKPN 318
            ||:.|.|..||:
Mouse   264 LTKKLHFCPKPS 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dcp-1NP_476974.1 CASc 71..313 CDD:214521 101/262 (39%)
Casp6NP_033941.3 CASc 20..272 CDD:214521 102/264 (39%)
Tri-arginine exosite. /evidence=ECO:0000250|UniProtKB:P55212 25..27 1/1 (100%)
130's region. /evidence=ECO:0000250|UniProtKB:P55212 108..125 3/16 (19%)

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